RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA725806", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 3

analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA725806 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19838952 19838952 PRJNA725806_P_NODE_87076_length_207_cov_4.711765_g86774_i0 PRJNA725806 87076 207 4.711765 9.75335355 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 52.8 0.018   NTclustered gi|2794868813|ref|XM_067917759.1| 135588 g86774 i0 100 0.135265700483092 28 0 14 0 16 43 363 336 Histomonas meleagridis uncharacterized protein (GO595_004608), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
22389353 22389353 PRJNA725806_P_NODE_46718_length_254_cov_1.589862_g46421_i0 PRJNA725806 46718 254 1.589862 4.03824948 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 52.8 0.023   NTclustered gi|2319651645|ref|XM_001328799.2| 412133 g46421 i0 100 0.110236220472441 28 0 11 0 89 116 2672 2645 Trichomonas vaginalis G3 chromosome condensation (TVAGG3_0376560), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
23664747 23664747 PRJNA725806_P_NODE_122699_length_182_cov_12.586207_g122397_i0 PRJNA725806 122699 182 12.586207 22.90689674 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.015   NTclustered gi|2794959540|ref|XM_067864880.1| 2049356 g122397 i0 100 0.153846153846154 28 0 15 0 111 138 1056 1029 Monocercomonoides exilis uncharacterized protein (MONOS_12272), mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
28989208 28989208 PRJNA725806_P_NODE_111928_length_189_cov_3.355263_g111626_i0 PRJNA725806 111928 189 3.355263 6.34144707 root 1 Root_unresolved Root_unresolved 42 0.0333   NR CAK8784147.1 28002 g111626 i0 44.4 2.33333333333333 45 25 71.4 0 187 53 294 338 CAK8784147.1 HINF_043409 [Hexamita inflata] diamond 441 42.4 0.990566037735849 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;