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contig_metadata

4 rows where bioproject = "PRJNA725806", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA725806 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27146659 27146659 PRJNA725806_P_NODE_86522_length_208_cov_1.350877_g86221_i0 PRJNA725806 86522 208 1.350877 2.80982416 Candidatus Saccharibacteria bacterium 49-2 1895829 Bacteria Bacteria 130 3.65e-33   NR OJU87461.1 1895829 g86221 i0 100 0.980769230769231 68 0 98.1 0 3 206 437 504 OJU87461.1 MAG: ATP-dependent DNA helicase PcrA [Candidatus Saccharibacteria bacterium 49-20] diamond 204 130 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
29736133 29736133 PRJNA725806_P_NODE_103530_length_195_cov_1.303797_g103228_i0 PRJNA725806 103530 195 1.303797 2.54240415 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 46.6 8.57e-4   NR MBN9398373.1 2026720 g103228 i0 41.1 0.861538461538462 56 29 83.1 3 33 194 378 431 MBN9398373.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 168 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30052101 30052101 PRJNA725806_P_NODE_18551_length_324_cov_1.177700_g18257_i0 PRJNA725806 18551 324 1.1777 3.815748 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 63.2 6.58e-9   NR HVX24508.1 2973664 g18257 i0 43.2 0.75 81 45 75 1 279 37 101 180 HVX24508.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 243 63.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30400296 30400296 PRJNA725806_P_NODE_66933_length_226_cov_9.523810_g66633_i0 PRJNA725806 66933 226 9.52381 21.5238106 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 43.5 0.0155   NR HET6924576.1 2973664 g66633 i0 32.4 0.902654867256637 68 45 88.9 1 214 14 71 138 HET6924576.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 204 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;