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contig_metadata

18 rows where bioproject = "PRJNA725806" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA725806 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
711745 711745 PRJNA725806_P_NODE_141741_length_172_cov_8.807407_g141439_i0 PRJNA725806 141741 172 8.807407 15.14874004 Dictyostelium purpureum 5786 Evosea other_Eukaryota 58.4 3.1e-4   NTclustered gi|330791112|ref|XM_003283591.1| 5786 g141439 i0 100 3.3546511627907 31 0 18 0 76 106 529 499 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_74608), partial mRNA blastn 577 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
711878 711878 PRJNA725806_P_NODE_41261_length_263_cov_2.057522_g40964_i0 PRJNA725806 41261 263 2.057522 5.41128286 Amoebozoa sp. 1892891 Root_unresolved Root_unresolved 429 9.489999999999999e-116   NTclustered gi|2651357787|gb|PP174302.1| 1892891 g40964 i0 96.875 43.148288973384 256 8 97 0 1 256 4595 4850 Amoebozoa sp. isolate 2M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11348 429 1 Eukaryota Amoebozoa             Amoebozoa sp.
1987924 1987924 PRJNA725806_P_NODE_43782_length_258_cov_8.556561_g43485_i0 PRJNA725806 43782 258 8.556561 22.07592738 Cavenderia fasciculata 261658 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|470242963|ref|XM_004355152.1| 261658 g43485 i0 92.5 0.155038759689922 40 1 16 2 212 251 1973 2010 Cavenderia fasciculata leucine-rich repeat-containing protein (DFA_07708), partial mRNA blastn 40 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
4540097 4540097 PRJNA725806_P_NODE_115824_length_186_cov_20.154362_g115522_i0 PRJNA725806 115824 186 20.154362 37.48711332 Entamoeba nuttalli 412467 Evosea other_Eukaryota 110 9.3e-20   NTclustered gi|672810861|ref|XM_008862247.1| 1076696 g115522 i0 84.545 1.94623655913978 110 17 59 0 56 165 776 667 Entamoeba nuttalli P19 flap nuclease, putative partial mRNA blastn 362 110 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba nuttalli
4540217 4540217 PRJNA725806_P_NODE_179624_length_156_cov_1.932773_g179322_i0 PRJNA725806 179624 156 1.932773 3.01512588 Didymium bahiense 289975 Evosea other_Eukaryota 289 9e-74   NTclustered gi|2528966063|gb|OR214927.1| 289975 g179322 i0 100 98.7692307692308 156 0 100 0 1 156 159 4 Didymium bahiense voucher HFJAU14001 small subunit ribosomal RNA gene, partial sequence blastn 15408 289 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium bahiense
7090692 7090692 PRJNA725806_P_NODE_58926_length_236_cov_4.648241_g58629_i0 PRJNA725806 58926 236 4.648241 10.96984876 Dictyostelium discoideum 44689 Evosea other_Eukaryota 65.8 2.72e-6   NTclustered gi|66803872|ref|XM_630666.1| 352472 g58629 i0 100 0.148305084745763 35 0 15 0 94 128 583 617 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0290273) mRNA, complete cds blastn 35 65.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
9640420 9640420 PRJNA725806_P_NODE_3748_length_475_cov_3.337900_g3483_i0 PRJNA725806 3748 475 3.3379 15.855025 Didymium iridis 5793 Evosea other_Eukaryota 592 2.2e-164   NTclustered gi|2687|emb|X60210.1| 5793 g3483 i0 89.722 2.17052631578947 467 42 97 6 14 475 5533 5068 D.iridis LSU rRNA gene blastn 1031 592 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
10123043 10123043 PRJNA725806_P_NODE_84348_length_209_cov_9.936047_g84047_i0 PRJNA725806 84348 209 9.936047 20.76633823 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 3.94e-4   NTclustered gi|330798228|ref|XM_003287109.1| 5786 g84047 i0 92.857 16.799043062201 42 0 20 3 21 62 2110 2072 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_151220), partial mRNA blastn 3511 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12674109 12674109 PRJNA725806_P_NODE_83970_length_210_cov_2.323699_g83669_i0 PRJNA725806 83970 210 2.323699 4.8797679 root 1 Root_unresolved Root_unresolved 52.8 0.018   NTclustered gi|831788594|ref|XM_012903342.1| 1410327 g83669 i0 100 0.266666666666667 28 0 13 0 60 87 3603 3576 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 56 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
14740932 14740932 PRJNA725806_P_NODE_25372_length_299_cov_6.790076_g25075_i0 PRJNA725806 25372 299 6.790076 20.30232724 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.028   NTclustered gi|470421499|ref|XM_004337349.1| 1257118 g25075 i0 100 0.0936454849498328 28 0 9 0 191 218 275 248 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_275580), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16014233 16014233 PRJNA725806_P_NODE_127333_length_180_cov_2.734266_g127031_i0 PRJNA725806 127333 180 2.734266 4.9216788 Cavenderia fasciculata 261658 Evosea other_Eukaryota 62.1 2.54e-5   NTclustered gi|470240291|ref|XM_004354085.1| 261658 g127031 i0 95 9.33888888888889 40 1 22 1 45 83 394 433 Cavenderia fasciculata eukaryotic translation initiation factor 5B (eIF5b), partial mRNA blastn 1681 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
16014485 16014485 PRJNA725806_P_NODE_79553_length_214_cov_1.661017_g79252_i0 PRJNA725806 79553 214 1.661017 3.55457638 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 75 4.02e-9   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g79252 i0 91.071 0.911214953271028 56 3 26 2 142 196 6788 6734 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 195 75 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
18563715 18563715 PRJNA725806_P_NODE_6175_length_421_cov_1.953125_g5892_i0 PRJNA725806 6175 421 1.953125 8.22265625 Didymium iridis 5793 Evosea other_Eukaryota 614 4.119999999999999e-171   NTclustered gi|116010574|emb|AM407419.1| 5793 g5892 i0 92.974 73.29216152019 427 21 100 9 1 421 1260 837 Didymium iridis partial 26S rRNA gene, isolate Pan3-3 blastn 30856 614 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
23664908 23664908 PRJNA725806_P_NODE_34719_length_276_cov_3.690377_g34422_i0 PRJNA725806 34719 276 3.690377 10.18544052 Heterostelium album 2086695 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|1160565192|ref|XM_020580218.1| 670386 g34422 i0 90.909 0.282608695652174 44 1 15 3 120 161 1668 1710 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 78 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
23664951 23664951 PRJNA725806_P_NODE_51359_length_246_cov_7.033493_g51062_i0 PRJNA725806 51359 246 7.033493 17.30239278 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|66801194|ref|XM_629521.1| 352472 g51062 i0 89.13 0.186991869918699 46 2 17 3 203 245 664 709 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0292612) mRNA, complete cds blastn 46 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
24938291 24938291 PRJNA725806_P_NODE_1720_length_593_cov_8.571942_g1497_i0 PRJNA725806 1720 593 8.571942 50.83161606 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.016   NTclustered gi|66801194|ref|XM_629521.1| 352472 g1497 i0 89.13 0.0775716694772344 46 2 7 3 550 592 664 709 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0292612) mRNA, complete cds blastn 46 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
25421069 25421069 PRJNA725806_P_NODE_57500_length_238_cov_3.328358_g57203_i0 PRJNA725806 57500 238 3.328358 7.92149204 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.006   NTclustered gi|330844377|ref|XM_003294057.1| 5786 g57203 i0 100 1.08403361344538 29 0 12 0 140 168 156 128 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_84602), partial mRNA blastn 258 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27589565 27589565 PRJNA725806_P_NODE_80524_length_213_cov_2.420455_g80223_i0 PRJNA725806 80524 213 2.420455 5.15556915 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 72 1.28e-13   NR XP_012760042.1 1410327 g80223 i0 78 1.15492957746479 41 8 57.7 1 91 213 92 131 XP_012760042.1 hypothetical protein SAMD00019534_036960 [Acytostelium subglobosum LB1] diamond 246 72 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;