RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA724039" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA724039 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2469521 2469521 PRJNA724039_S_NODE_7602_length_242_cov_2.102439_g7395_i0 PRJNA724039 7602 242 2.102439 5.08790238 Eukaryota 2759 Fungi Fungi 123 1.37e-30   NR KAI8326243.1 61414 g7395 i0 76.8 28.2892561983471 82 17 99.2 1 3 242 37 118 KAI8326243.1 putative EFT2-translation elongation factor eEF2 [Martensiomyces pterosporus] diamond 6846 124 0.991935483870968 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Martensiomyces Martensiomyces pterosporus
2469529 2469529 PRJNA724039_S_NODE_8522_length_226_cov_2.089947_g8315_i0 PRJNA724039 8522 226 2.089947 4.72328022 Fungi 4751 Fungi Fungi 138 1.4799999999999999e-40   NR KAJ1962464.1 4866 g8315 i0 82.7 44.8008849557522 75 13 99.6 0 1 225 7 81 KAJ1962464.1 translation elongation factor EF-1 alpha, partial [Dipsacomyces acuminosporus] diamond 10125 139 0.992805755395683 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Dipsacomyces Dipsacomyces acuminosporus
3745979 3745979 PRJNA724039_S_NODE_9203_length_215_cov_3.376404_g8996_i0 PRJNA724039 9203 215 3.376404 7.2592686 Smittium 4888 Fungi Fungi 80.5 8.7e-11   NTclustered gi|397529728|gb|JQ302913.1| 133382 g8996 i0 92.727 22.6372093023256 55 4 26 0 161 215 1046 1100 Smittium morbosum note PCR amp code:70-97 28S ribosomal RNA gene, partial sequence blastn 4867 80.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium morbosum
17289124 17289124 PRJNA724039_S_NODE_15154_length_164_cov_1.590551_g14947_i0 PRJNA724039 15154 164 1.590551 2.60850364 Basidiobolus ranarum 34480 Fungi Fungi 111 2.23e-20   NTclustered gi|358030849|dbj|AB609158.1| 34480 g14947 i0 80.392 2.6219512195122 153 24 91 6 2 151 1090 1239 Basidiobolus ranarum EF2 gene for translation elongation factor 2, partial cds, strain: NRRL 34594 blastn 430 111 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
21113746 21113746 PRJNA724039_S_NODE_3297_length_401_cov_9.170330_g3090_i0 PRJNA724039 3297 401 9.17033 36.7730233 Zoophagus pectosporus 2082958 Fungi Fungi 126 2.23e-24   NTclustered gi|2130025291|gb|OL396565.1| 2082958 g3090 i0 83.704 27.6084788029925 135 21 33 1 96 229 335 201 Zoophagus pectosporus isolate B39 large subunit ribosomal RNA gene, partial sequence blastn 11071 126 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Zoopagaceae Zoophagus Zoophagus pectosporus
28126162 28126162 PRJNA724039_S_NODE_13565_length_174_cov_1.394161_g13358_i0 PRJNA724039 13565 174 1.394161 2.42584014 Linderina pennispora 61395 Fungi Fungi 95.9 1.37e-23   NR KAJ1941459.1 61395 g13358 i0 75.4 5.79310344827586 57 14 98.3 0 2 172 19 75 KAJ1941459.1 40S ribosomal protein, partial [Linderina pennispora] diamond 1008 95.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
28188987 28188987 PRJNA724039_S_NODE_5506_length_296_cov_2.525097_g5299_i0 PRJNA724039 5506 296 2.525097 7.47428712 Conidiobolus coronatus NRRL 28638 796925 Fungi Fungi 99.8 1.03e-24   NR KXN69406.1 796925 g5299 i0 70.8 6.82094594594595 65 19 65.9 0 2 196 41 105 KXN69406.1 ribosomal protein S26e [Conidiobolus coronatus NRRL 28638] diamond 2019 99.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus coronatus
30810513 30810513 PRJNA724039_S_NODE_11874_length_187_cov_1.240000_g11667_i0 PRJNA724039 11874 187 1.24 2.3188 Dimargaris verticillata 2761393 Fungi Fungi 68.6 1.18e-12   NR KAJ1973027.1 2761393 g11667 i0 63.8 0.754010695187166 47 17 75.4 0 185 45 108 154 KAJ1973027.1 40S ribosomal protein S11-B [Dimargaris verticillata] diamond 141 68.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dimargaris Dimargaris verticillata
31284432 31284432 PRJNA724039_S_NODE_11015_length_194_cov_3.038217_g10808_i0 PRJNA724039 11015 194 3.038217 5.89414098 Smittium megazygosporum 133381 Fungi Fungi 73.9 2.73e-14   NR PVV01460.1 133381 g10808 i0 54.8 0.958762886597938 62 28 95.9 0 193 8 116 177 PVV01460.1 hypothetical protein BB560_004118 [Smittium megazygosporum] diamond 186 73.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium megazygosporum
31537768 31537768 PRJNA724039_S_NODE_10736_length_197_cov_2.487500_g10529_i0 PRJNA724039 10736 197 2.4875 4.900375 Smittium megazygosporum 133381 Fungi Fungi 87.4 5.18e-20   NR PVU86955.1 133381 g10529 i0 66.7 5.61928934010152 63 21 95.9 0 193 5 37 99 PVU86955.1 hypothetical protein BB560_006579 [Smittium megazygosporum] diamond 1107 87.4 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium megazygosporum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;