RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA724039" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA724039 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5814811 5814811 PRJNA724039_S_NODE_5465_length_297_cov_6.730769_g5258_i0 PRJNA724039 5465 297 6.730769 19.99038393 Ripaflec virus 3130560 Viruses Viruses 364 3.119999999999999e-96   NTclustered gi|2717320098|gb|PP172862.1| 3130560 g5258 i0 89.037 165.037037037037 301 24 100 8 1 297 5529 5234 MAG: Ripaflec virus isolate KCAP2_k141_128097 genomic sequence blastn 49016 364 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaflec virus
22388432 22388432 PRJNA724039_S_NODE_10018_length_205_cov_6.309524_g9811_i0 PRJNA724039 10018 205 6.309524 12.9345242 Ripaglys virus 3130696 Viruses Viruses 150 6.17e-32   NTclustered gi|2717320496|gb|PP172998.1| 3130696 g9811 i0 80.583 73.7268292682927 206 30 99 7 2 203 1653 1852 MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence blastn 15114 150 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaglys virus
23664260 23664260 PRJNA724039_S_NODE_5339_length_301_cov_3.715909_g5132_i0 PRJNA724039 5339 301 3.715909 11.18488609 Ripaglys virus 3130696 Viruses Viruses 285 2.54e-72   NTclustered gi|2717320496|gb|PP172998.1| 3130696 g5132 i0 84.158 512.016611295681 303 39 99 6 3 301 1010 1307 MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence blastn 154117 285 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaglys virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;