RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where bioproject = "PRJNA724039" and tax_phylum = "Acidobacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 22 ✖

tax_kingdom 1

bioproject 1

  • PRJNA724039 · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1987119 1987119 PRJNA724039_S_NODE_14702_length_166_cov_2.914729_g14495_i0 PRJNA724039 14702 166 2.914729 4.83845014 Terriglobia bacterium 2081523 Bacteria Bacteria 106 1.05e-18   NTclustered gi|2518552083|emb|OX638355.1| 2081523 g14495 i0 78.824 28.8915662650602 170 26 99 10 1 165 425229 425393 MAG: Terriglobia bacterium isolate 290eebee-5386-4bec-b87c-7b5c19ab3581 genome assembly, chromosome: 1 blastn 4796 106 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
3262370 3262370 PRJNA724039_S_NODE_13483_length_174_cov_2.985401_g13276_i0 PRJNA724039 13483 174 2.985401 5.19459774 Edaphobacter flagellatus 1933044 Bacteria Bacteria 124 3.0599999999999998e-24   NTclustered gi|2304905232|gb|CP073697.1| 1933044 g13276 i0 80.571 241.718390804598 175 23 97 10 2 170 3267151 3266982 Edaphobacter flagellatus strain HZ411 chromosome, complete genome blastn 42059 124 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter flagellatus
5814878 5814878 PRJNA724039_S_NODE_9425_length_212_cov_4.302857_g9218_i0 PRJNA724039 9425 212 4.302857 9.12205684 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 132 2.33e-26   NTclustered gi|2621701418|emb|OY760136.1| 2910147 g9218 i0 85.385 21.7452830188679 130 15 61 4 55 183 1699525 1699399 MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 blastn 4610 132 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
7089813 7089813 PRJNA724039_S_NODE_12366_length_182_cov_6.800000_g12159_i0 PRJNA724039 12366 182 6.8 12.376 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 305 1.08e-78   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g12159 i0 97.74 37.1923076923077 177 4 97 0 1 177 635884 636060 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 6769 305 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
8364326 8364326 PRJNA724039_S_NODE_10387_length_201_cov_2.500000_g10180_i0 PRJNA724039 10387 201 2.5 5.025 Acidobacteriota bacterium 1978231 Bacteria Bacteria 207 3.53e-49   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g10180 i0 86.387 282.611940298507 191 25 95 1 1 190 3298452 3298262 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 56805 207 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
8364550 8364550 PRJNA724039_S_NODE_6427_length_268_cov_14.922078_g6220_i0 PRJNA724039 6427 268 14.922078 39.99116904 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 313 1.02e-80   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g6220 i0 89.2 327.761194029851 250 27 93 0 19 268 3559014 3559263 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 87840 313 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
9639760 9639760 PRJNA724039_S_NODE_7568_length_242_cov_14.482927_g7361_i0 PRJNA724039 7568 242 14.482927 35.04868334 Acidobacteriota bacterium 1978231 Bacteria Bacteria 268 1.99e-67   NTclustered gi|1958093598|gb|CP065003.1| 1978231 g7361 i0 87.448 386.838842975207 239 22 98 5 1 236 317718 317951 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome blastn 93615 268 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
10915153 10915153 PRJNA724039_S_NODE_14369_length_168_cov_2.916031_g14162_i0 PRJNA724039 14369 168 2.916031 4.89893208 Acidobacteriota bacterium 1978231 Bacteria Bacteria 56.5 0.001   NTclustered gi|2621704107|emb|OY761556.1| 1978231 g14162 i0 96.97 0.380952380952381 33 1 20 0 136 168 3306936 3306968 MAG: Acidobacteriota bacterium isolate 5ca539cc-3996-4499-a76f-7ad0c810d377 genome assembly, chromosome: 1 blastn 64 56.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
10915293 10915293 PRJNA724039_S_NODE_5349_length_301_cov_2.587121_g5142_i0 PRJNA724039 5349 301 2.587121 7.78723421 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 529 1.0599999999999996e-145   NTclustered gi|2874253692|emb|OY969418.1| 171953 g5142 i0 98.344 93.3820598006645 302 4 100 1 1 301 4232850 4233151 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 28108 529 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
12673751 12673751 PRJNA724039_S_NODE_17910_length_151_cov_1.368421_g17703_i0 PRJNA724039 17910 151 1.368421 2.06631571 Chloracidobacterium 458032 Bacteria Bacteria 117 4.31e-22   NTclustered gi|157273292|gb|EF531339.1| 458033 g17703 i0 81.944 97.0860927152318 144 20 93 5 10 150 236428 236288 Candidatus Chloracidobacterium thermophilum clone BAC M60-018 J19, complete sequence blastn 14660 117 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium thermophilum
16013683 16013683 PRJNA724039_S_NODE_2333_length_492_cov_51.281319_g2133_i0 PRJNA724039 2333 492 51.281319 252.30408948 Acidobacteriota bacterium 1978231 Bacteria Bacteria 538 3.0199999999999993e-148   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g2133 i0 86.519 356.932926829268 497 57 100 9 1 492 3298668 3298177 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 175611 538 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
16013708 16013708 PRJNA724039_S_NODE_3413_length_393_cov_8.146067_g3206_i0 PRJNA724039 3413 393 8.146067 32.01404331 Acidobacteriota bacterium 1978231 Bacteria Bacteria 383 1.1699999999999998e-101   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g3206 i0 84.635 123.781170483461 397 47 99 12 1 391 4649523 4649135 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 48646 383 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
19838209 19838209 PRJNA724039_S_NODE_8496_length_226_cov_4.597884_g8289_i0 PRJNA724039 8496 226 4.597884 10.39121784 Acidobacteriota bacterium 1978231 Bacteria Bacteria 99 2.55e-16   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g8289 i0 82.114 2.30088495575221 123 14 53 8 1 120 1523674 1523791 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 520 99 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
24937545 24937545 PRJNA724039_S_NODE_10900_length_195_cov_6.626582_g10693_i0 PRJNA724039 10900 195 6.626582 12.9218349 Chloracidobacterium validum 2821543 Bacteria Bacteria 183 5.729999999999998e-42   NTclustered gi|2033659757|gb|CP072648.1| 2821543 g10693 i0 94.167 150.184615384615 120 7 62 0 1 120 105707 105588 Chloracidobacterium validum strain BV2-C chromosome 1, complete sequence blastn 29286 183 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium validum
24937750 24937750 PRJNA724039_S_NODE_6320_length_271_cov_2.846154_g6113_i0 PRJNA724039 6320 271 2.846154 7.71307734 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 224 4.979999999999999e-54   NTclustered gi|2874253677|emb|OY969111.1| 171953 g6113 i0 85.52 379.19557195572 221 25 80 7 1 216 714368 714586 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 blastn 102762 224 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
27305209 27305209 PRJNA724039_S_NODE_17063_length_154_cov_3.273504_g16856_i0 PRJNA724039 17063 154 3.273504 5.04119616 Candidatus Sulfotelmatobacter sp. 2771375 Bacteria Bacteria 41.2 0.0253   NR HET9305486.1 2771375 g16856 i0 51.6 1.20779220779221 31 15 60.4 0 8 100 81 111 HET9305486.1 DUF2127 domain-containing protein [Candidatus Sulfotelmatobacter sp.] diamond 186 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Candidatus Sulfotelmatobacter sp.
28788971 28788971 PRJNA724039_S_NODE_17167_length_154_cov_1.367521_g16960_i0 PRJNA724039 17167 154 1.367521 2.10598234 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 48.9 7.41e-5   NR HZF14297.1 2651171 g16960 i0 45.8 0.935064935064935 48 26 93.5 0 145 2 126 173 HZF14297.1 IPTL-CTERM sorting domain-containing protein [Thermoanaerobaculia bacterium] diamond 144 48.9 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29010563 29010563 PRJNA724039_S_NODE_14008_length_171_cov_1.164179_g13801_i0 PRJNA724039 14008 171 1.164179 1.99074609 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 42.7 0.0145   NR HLE20026.1 2793154 g13801 i0 43.6 0.964912280701754 55 30 94.7 1 1 162 202 256 HLE20026.1 ABC transporter permease [Vicinamibacteria bacterium] diamond 165 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
29672909 29672909 PRJNA724039_S_NODE_15890_length_160_cov_1.577236_g15683_i0 PRJNA724039 15890 160 1.577236 2.5235776 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 43.5 0.00601   NR HEY8021067.1 2651171 g15683 i0 45.1 0.95625 51 25 95.6 1 155 3 65 112 HEY8021067.1 ParB/RepB/Spo0J family partition protein [Thermoanaerobaculia bacterium] diamond 153 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31105089 31105089 PRJNA724039_S_NODE_18215_length_150_cov_1.008850_g18008_i0 PRJNA724039 18215 150 1.00885 1.513275 Bacteria 2 Bacteria Bacteria 45.4 0.00114   NR MBW8894768.1 1978231 g18008 i0 51.1 2.62 45 22 90 0 14 148 327 371 MBW8894768.1 ABC transporter permease [Acidobacteriota bacterium] diamond 393 45.8 0.991266375545852 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31221011 31221011 PRJNA724039_S_NODE_9235_length_215_cov_1.573034_g9028_i0 PRJNA724039 9235 215 1.573034 3.3820231 Acidobacteriota bacterium 1978231 Bacteria Bacteria 60.8 9.64e-9   NR MEM9553623.1 1978231 g9028 i0 46.4 0.781395348837209 56 26 72.6 1 3 158 287 342 MEM9553623.1 thaumatin family protein [Acidobacteriota bacterium] diamond 168 60.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31347919 31347919 PRJNA724039_S_NODE_17196_length_154_cov_1.290598_g16989_i0 PRJNA724039 17196 154 1.290598 1.98752092 Candidatus Sulfopaludibacter sp. SbA3 2043164 Bacteria Bacteria 41.2 0.0395   NR SPE42860.1 2043164 g16989 i0 40.4 0.915584415584416 47 24 87.7 2 145 11 343 387 SPE42860.1 hypothetical protein SBA3_690046 [Candidatus Sulfopaludibacter sp. SbA3] diamond 141 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Sulfopaludibacter Candidatus Sulfopaludibacter sp. SbA3

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;