RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA724039", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA724039 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9639767 9639767 PRJNA724039_S_NODE_8208_length_231_cov_2.608247_g8001_i0 PRJNA724039 8208 231 2.608247 6.02505057 Halichondria panicea 6063 Porifera other_Eukaryota 112 2.67e-29   NR XP_064384635.1 6063 g8001 i0 75.3 3 77 19 100 0 1 231 46 122 XP_064384635.1 large ribosomal subunit protein uL11-like [Halichondria panicea] diamond 693 112 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
28925685 28925685 PRJNA724039_S_NODE_14988_length_165_cov_1.218750_g14781_i0 PRJNA724039 14988 165 1.21875 2.0109375 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.6 7.68e-16   NR CCQ18674.1 27933 g14781 i0 82.1 105.709090909091 39 7 70.9 0 160 44 13 51 CCQ18674.1 60S ribosomal protein L39 [Sycon ciliatum] diamond 17442 73.9 0.995940460081191 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;