RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA724039", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA724039 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18562876 18562876 PRJNA724039_S_NODE_16875_length_155_cov_2.398305_g16668_i0 PRJNA724039 16875 155 2.398305 3.71737275 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.01e-15   NR KAF4686433.1 32597 g16668 i0 78 4.85806451612903 50 11 96.8 0 3 152 109 158 KAF4686433.1 40S ribosomal protein S6 [Perkinsus olseni] diamond 753 79.3 0.991172761664565 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27589478 27589478 PRJNA724039_S_NODE_12744_length_180_cov_1.398601_g12537_i0 PRJNA724039 12744 180 1.398601 2.5174818 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 52.4 5.46e-6   NR KAF4657565.1 32597 g12537 i0 66.7 3.85 33 11 55 0 101 3 100 132 KAF4657565.1 60S ribosomal protein L12, partial [Perkinsus olseni] diamond 693 52.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;