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contig_metadata

28 rows where bioproject = "PRJNA724039", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 28 ✖

tax_clade 1

  • Sar · 28 ✖

bioproject 1

  • PRJNA724039 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
711079 711079 PRJNA724039_S_NODE_15321_length_163_cov_1.611111_g15114_i0 PRJNA724039 15321 163 1.611111 2.62611093 Odontochlamys alpestris 1518540 SAR_Eukaryotes SAR_Eukaryotes 121 3.669999999999999e-23   NTclustered gi|1183126467|gb|KX302678.1| 1518541 g15114 i0 86.486 3.21472392638037 111 13 67 2 55 163 819 709 Odontochlamys alpestris biciliata clone B172 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 524 121 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chlamydodontidae Odontochlamys Odontochlamys alpestris
3745957 3745957 PRJNA724039_S_NODE_6283_length_272_cov_3.676596_g6076_i0 PRJNA724039 6283 272 3.676596 10.00034112 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 488 1.6099999999999996e-133   NTclustered gi|1802599796|gb|MT001205.1| 41631 g6076 i0 99.259 99.4779411764706 270 2 99 0 3 272 288 19 Colpoda sp. strain HFCC864 small subunit ribosomal RNA gene, partial sequence blastn 27058 488 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
4539549 4539549 PRJNA724039_S_NODE_2784_length_442_cov_5.158025_g2577_i0 PRJNA724039 2784 442 5.158025 22.7984705 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 749 0   NTclustered gi|2651357791|gb|PP174306.1| 41631 g2577 i0 97.285 87.3914027149321 442 11 100 1 1 442 3669 3229 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 38627 749 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
8364365 8364365 PRJNA724039_S_NODE_12387_length_182_cov_3.579310_g12180_i0 PRJNA724039 12387 182 3.57931 6.5143442 Tetrahymena sp. FN-2012 1217406 SAR_Eukaryotes SAR_Eukaryotes 337 3.82e-88   NTclustered gi|400269896|gb|JX271898.1| 1217406 g12180 i0 100 100.620879120879 182 0 100 0 1 182 557 376 Tetrahymena sp. FN-2012 strain HFCC700 28S large subunit ribosomal RNA gene, partial sequence blastn 18313 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. FN-2012
8364494 8364494 PRJNA724039_S_NODE_3987_length_358_cov_6.769470_g3780_i0 PRJNA724039 3987 358 6.76947 24.2347026 Colpoda steini 63136 SAR_Eukaryotes SAR_Eukaryotes 204 8.849999999999998e-48   NTclustered gi|2166921685|gb|OL894853.1| 63136 g3780 i0 97.5 39.3631284916201 120 1 34 2 239 358 4 121 Colpoda steini clone MITTA small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 14092 204 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda steini
8847162 8847162 PRJNA724039_S_NODE_17987_length_150_cov_26.265487_g17780_i0 PRJNA724039 17987 150 26.265487 39.3982305 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 278 1.85e-70   NTclustered gi|2651357791|gb|PP174306.1| 41631 g17780 i0 100 84.1133333333333 150 0 100 0 1 150 1530 1381 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12617 278 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
11397789 11397789 PRJNA724039_S_NODE_3889_length_363_cov_6.085890_g3682_i0 PRJNA724039 3889 363 6.08589 22.0917807 Colpodidae 5978 SAR_Eukaryotes SAR_Eukaryotes 617 2.71e-172   NTclustered gi|2166921685|gb|OL894853.1| 63136 g3682 i0 97.772 65.3856749311295 359 6 99 2 2 360 924 568 Colpoda steini clone MITTA small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 23735 623 0.990369181380417 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda steini
12190430 12190430 PRJNA724039_S_NODE_15970_length_159_cov_4.688525_g15763_i0 PRJNA724039 15970 159 4.688525 7.45475475 Opercularia sp. 2 2979175 SAR_Eukaryotes SAR_Eukaryotes 226 7.329999999999998e-55   NTclustered gi|2304601488|gb|OP458309.1| 2979175 g15763 i0 92.405 0.993710691823899 158 12 99 0 2 159 546 389 Opercularia sp. 2 large subunit ribosomal RNA gene, partial sequence blastn 158 226 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. 2
13464839 13464839 PRJNA724039_S_NODE_12271_length_183_cov_3.705479_g12064_i0 PRJNA724039 12271 183 3.705479 6.78102657 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 289 1.0899999999999998e-73   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g12064 i0 95.082 67.448087431694 183 9 100 0 1 183 661 843 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 12343 289 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
15222733 15222733 PRJNA724039_S_NODE_16652_length_156_cov_2.058824_g16445_i0 PRJNA724039 16652 156 2.058824 3.21176544 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 289 9e-74   NTclustered gi|2651357791|gb|PP174306.1| 41631 g16445 i0 100 99.5897435897436 156 0 100 0 1 156 2888 2733 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15536 289 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
17289106 17289106 PRJNA724039_S_NODE_14194_length_169_cov_4.689394_g13987_i0 PRJNA724039 14194 169 4.689394 7.92507586 Tetrahymena paravorax 5905 SAR_Eukaryotes SAR_Eukaryotes 200 4.76e-47   NTclustered gi|114329857|ref|NC_008338.1| 5905 g13987 i0 88.957 96.5798816568047 163 17 98 1 4 166 1958 2119 Tetrahymena paravorax mitochondrion, complete genome blastn 16322 200 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena paravorax
17771931 17771931 PRJNA724039_S_NODE_5674_length_290_cov_19.383399_g5467_i0 PRJNA724039 5674 290 19.383399 56.2118571 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 91.6 5.69e-14   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5467 i0 94.828 0.6 58 3 20 0 1 58 3025 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 174 91.6 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
18563008 18563008 PRJNA724039_S_NODE_7335_length_247_cov_18.628571_g7128_i0 PRJNA724039 7335 247 18.628571 46.01257037 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 374 4.189999999999998e-99   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g7128 i0 93.927 56.4898785425101 247 15 100 0 1 247 362 116 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 13953 374 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19045970 19045970 PRJNA724039_S_NODE_4975_length_314_cov_25.462094_g4768_i0 PRJNA724039 4975 314 25.462094 79.95097516 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 575 1.4099999999999994e-159   NTclustered gi|2651357791|gb|PP174306.1| 41631 g4768 i0 99.682 97.6114649681529 314 1 100 0 1 314 2076 1763 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30650 580 0.991379310344828 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
21596424 21596424 PRJNA724039_S_NODE_6017_length_280_cov_5.325103_g5810_i0 PRJNA724039 6017 280 5.325103 14.9102884 Colpodidae 5978 SAR_Eukaryotes SAR_Eukaryotes 484 2.15e-132   NTclustered gi|2166921685|gb|OL894853.1| 63136 g5810 i0 97.857 49.975 280 6 100 0 1 280 431 152 Colpoda steini clone MITTA small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 13993 484 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda steini
22388462 22388462 PRJNA724039_S_NODE_11898_length_186_cov_7.845638_g11691_i0 PRJNA724039 11898 186 7.845638 14.59288668 Tetrahymena paravorax 5905 SAR_Eukaryotes SAR_Eukaryotes 174 3.25e-39   NTclustered gi|114329857|ref|NC_008338.1| 5905 g11691 i0 90.84 19.7258064516129 131 11 70 1 56 186 3000 2871 Tetrahymena paravorax mitochondrion, complete genome blastn 3669 174 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena paravorax
22388533 22388533 PRJNA724039_S_NODE_16298_length_158_cov_1.173554_g16091_i0 PRJNA724039 16298 158 1.173554 1.85421532 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 243 7.219999999999999e-60   NTclustered gi|347439275|gb|JN111986.1| 151077 g16091 i0 94.304 93.6012658227848 158 9 100 0 1 158 400 243 Chilodonella uncinata strain USA_WH clone SP2 beta tubulin (btub) gene, partial cds; macronuclear blastn 14789 243 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23664081 23664081 PRJNA724039_S_NODE_1059_length_845_cov_6.326733_g919_i0 PRJNA724039 1059 845 6.326733 53.46089385 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 110 4.98e-19   NTclustered gi|345894117|ref|NC_015981.1| 5932 g919 i0 82.443 9.89704142011834 131 18 15 5 685 811 3368 3239 Ichthyophthirius multifiliis mitochondrion, complete genome blastn 8363 110 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
24937627 24937627 PRJNA724039_S_NODE_15840_length_160_cov_2.447154_g15633_i0 PRJNA724039 15840 160 2.447154 3.9154464 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 274 2.5999999999999997e-69   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g15633 i0 97.5 3 160 4 100 0 1 160 612 453 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 480 274 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
24937638 24937638 PRJNA724039_S_NODE_16580_length_156_cov_3.974790_g16373_i0 PRJNA724039 16580 156 3.97479 6.2006724 Paramecium caudatum 5885 SAR_Eukaryotes SAR_Eukaryotes 84.2 4.56e-12   NTclustered gi|299830252|ref|NC_014262.1| 5885 g16373 i0 92.982 1.44230769230769 57 4 37 0 46 102 1438 1494 Paramecium caudatum mitochondrion, complete genome blastn 225 84.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium caudatum
25420707 25420707 PRJNA724039_S_NODE_16620_length_156_cov_2.605042_g16413_i0 PRJNA724039 16620 156 2.605042 4.06386552 Helicoprorodontidae 1607782 SAR_Eukaryotes SAR_Eukaryotes 137 3.45e-28   NTclustered gi|375305434|gb|JF975394.1| 652932 g16413 i0 90.385 78.7051282051282 104 10 67 0 19 122 309 206 Trachelotractus entzi isolate LWW07033111 28S ribosomal RNA gene, partial sequence blastn 12278 137 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida   Trachelotractus Trachelotractus entzi
27904809 27904809 PRJNA724039_S_NODE_13385_length_175_cov_1.688406_g13178_i0 PRJNA724039 13385 175 1.688406 2.9547105 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 62.8 1.98e-10   NR CAD8127098.1 65129 g13178 i0 71.7 0.788571428571429 46 13 78.9 0 1 138 91 136 CAD8127098.1 unnamed protein product [Paramecium sonneborni] diamond 138 62.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
28126166 28126166 PRJNA724039_S_NODE_14825_length_166_cov_0.899225_g14618_i0 PRJNA724039 14825 166 0.899225 1.4927135 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 72.8 8.37e-14   NR TNV71297.1 5974 g14618 i0 63.6 0.993975903614458 55 20 99.4 0 166 2 158 212 TNV71297.1 hypothetical protein FGO68_gene13476 [Halteria grandinella] diamond 165 72.8 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
28578555 28578555 PRJNA724039_S_NODE_13707_length_173_cov_1.279412_g13500_i0 PRJNA724039 13707 173 1.279412 2.21338276 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.57e-5   NR XP_004035553.1 5932 g13500 i0 50 2.20231213872832 44 22 76.3 0 170 39 76 119 XP_004035553.1 hypothetical protein IMG5_097440 [Ichthyophthirius multifiliis] diamond 381 49.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29736118 29736118 PRJNA724039_S_NODE_17690_length_152_cov_1.260870_g17483_i0 PRJNA724039 17690 152 1.26087 1.9165224 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 75.9 7.19e-16   NR KRX10691.1 266149 g17483 i0 64 0.986842105263158 50 18 98.7 0 150 1 36 85 KRX10691.1 Translation protein SH3-like domain [Pseudocohnilembus persalinus] diamond 150 75.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
30463384 30463384 PRJNA724039_S_NODE_17713_length_152_cov_1.069565_g17506_i0 PRJNA724039 17713 152 1.069565 1.6257388 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 73.2 1.99e-14   NR CDW79023.1 5949 g17506 i0 76 2.96052631578947 50 12 98.7 0 152 3 34 83 CDW79023.1 ribosomal protein 11a 60s large ribosomal subunit [Stylonychia lemnae] diamond 450 73.2 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32360441 32360441 PRJNA724039_S_NODE_6659_length_264_cov_1.647577_g6452_i0 PRJNA724039 6659 264 1.647577 4.34960328 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 82.4 1.74e-17   NR KRX06453.1 266149 g6452 i0 50.6 0.875 77 38 87.5 0 1 231 89 165 KRX06453.1 Ribosomal protein L11, N-terminal [Pseudocohnilembus persalinus] diamond 231 82.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32875188 32875188 PRJNA724039_S_NODE_6100_length_278_cov_1.410788_g5893_i0 PRJNA724039 6100 278 1.410788 3.92199064 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 87.8 5.45e-20   NR CAD8057916.1 5886 g5893 i0 56.7 3.61510791366906 67 29 72.3 0 266 66 33 99 CAD8057916.1 unnamed protein product [Paramecium primaurelia] diamond 1005 87.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;