contig_metadata
4 rows where bioproject = "PRJNA724039", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7572026 | 7572026 | PRJNA724039_S_NODE_4726_length_323_cov_4.786713_g4519_i0 | PRJNA724039 | 4726 | 323 | 4.786713 | 15.46108299 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 486 | 7.019999999999999e-133 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g4519 | i0 | 93.827 | 113.080495356037 | 324 | 18 | 100 | 2 | 1 | 323 | 174775 | 174453 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 36525 | 490 | 0.991836734693878 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 17289293 | 17289293 | PRJNA724039_S_NODE_8014_length_234_cov_3.010152_g7807_i0 | PRJNA724039 | 8014 | 234 | 3.010152 | 7.04375568 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 394 | 3.02e-105 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g7807 | i0 | 97.021 | 180.867521367521 | 235 | 6 | 100 | 1 | 1 | 234 | 1250399 | 1250165 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 42323 | 394 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 22388698 | 22388698 | PRJNA724039_S_NODE_9178_length_215_cov_58.264045_g8971_i0 | PRJNA724039 | 9178 | 215 | 58.264045 | 125.26769675 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 311 | 2.83e-80 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g8971 | i0 | 94.146 | 456.539534883721 | 205 | 10 | 95 | 2 | 12 | 215 | 2059093 | 2058890 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 98156 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 23664125 | 23664125 | PRJNA724039_S_NODE_13059_length_177_cov_2.142857_g12852_i0 | PRJNA724039 | 13059 | 177 | 2.142857 | 3.79285689 | Estrella lausannensis | 483423 | Bacteria | Bacteria | 115 | 1.88e-21 | NTclustered | gi|343183590|gb|JN201889.1| | 483423 | g12852 | i0 | 89.888 | 46.4124293785311 | 89 | 9 | 50 | 0 | 3 | 91 | 2378 | 2290 | Estrella lausannensis 23S ribosomal RNA gene, complete sequence | blastn | 8215 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Estrella | Estrella lausannensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;