RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA724039", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA724039 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9639676 9639676 PRJNA724039_S_NODE_3328_length_399_cov_35.190608_g3121_i0 PRJNA724039 3328 399 35.190608 140.41052592 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 516 1.13e-141   NTclustered gi|2814788338|emb|OY761159.2| 2838779 g3121 i0 90.025 231.022556390977 401 36 100 4 1 399 3737401 3737799 MAG: Candidatus Binatia bacterium isolate a3054953-5fa8-48fb-90a5-e173aac96f7a genome assembly, chromosome: 1 blastn 92178 516 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
24937808 24937808 PRJNA724039_S_NODE_9780_length_208_cov_4.397661_g9573_i0 PRJNA724039 9780 208 4.397661 9.14713488 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 313 7.569999999999998e-81   NTclustered gi|2531949172|emb|OY282457.1| 3036252 g9573 i0 94.146 47.7451923076923 205 12 99 0 2 206 988585 988381 MAG: uncultured Candidatus Binatia bacterium genome assembly, chromosome: 1 blastn 9931 313 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
30052073 30052073 PRJNA724039_S_NODE_9391_length_213_cov_1.744318_g9184_i0 PRJNA724039 9391 213 1.744318 3.71539734 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 70.9 2.05e-13   NR HEY2774878.1 2838779 g9184 i0 43 1.11267605633803 79 35 97.2 1 209 3 40 118 HEY2774878.1 DUF2147 domain-containing protein [Candidatus Binatia bacterium] diamond 237 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;