RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA724039", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA724039 · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23664225 23664225 PRJNA724039_S_NODE_3539_length_385_cov_3.816092_g3332_i0 PRJNA724039 3539 385 3.816092 14.6919542 Thecamonas trahens 529818 Root_unresolved Root_unresolved 235 3.3999999999999996e-57   NTclustered gi|761380055|ref|NC_026452.1| 529818 g3332 i0 80.745 187.823376623377 322 45 81 14 1 310 1814 1498 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 72312 235 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30188867 30188867 PRJNA724039_S_NODE_16532_length_157_cov_1.208333_g16325_i0 PRJNA724039 16532 157 1.208333 1.89708281 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.9 1.35e-12   NR XP_013755984.1 461836 g16325 i0 66.7 20.5796178343949 48 16 91.7 0 151 8 71 118 XP_013755984.1 serine carboxypeptidase [Thecamonas trahens ATCC 50062] diamond 3231 70.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;