RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA724011" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA724011 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14739533 14739533 PRJNA724011_P_NODE_19732_length_662_cov_2.315789_g18724_i0 PRJNA724011 19732 662 2.315789 15.33052318 Candidatus Elarobacter sp. 3047550 Bacteria Bacteria 79 7.72e-14   NR HEY0392869.1 3047550 g18724 i0 40.2 2.61480362537764 117 63 51.7 4 343 2 2 114 HEY0392869.1 HAD family hydrolase [Candidatus Elarobacter sp.] diamond 1731 79 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Elarobacter Candidatus Elarobacter sp.
23663879 23663879 PRJNA724011_P_NODE_76579_length_285_cov_1.311321_g75556_i0 PRJNA724011 76579 285 1.311321 3.73726485 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 52.8 0.026   NTclustered gi|2874254010|emb|OY970335.1| 3107663 g75556 i0 100 0.0982456140350877 28 0 10 0 253 280 822216 822189 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10064.bin.c.2 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30620826 30620826 PRJNA724011_P_NODE_82233_length_273_cov_0.940000_g81210_i0 PRJNA724011 82233 273 0.94 2.5662 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 45.8 0.00439   NR HLX25562.1 2952917 g81210 i0 42.9 0.538461538461538 49 27 52.7 1 246 103 357 405 HLX25562.1 peptide ABC transporter substrate-binding protein [Candidatus Cybelea sp.] diamond 147 45.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;