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contig_metadata

9 rows where bioproject = "PRJNA724011" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA724011 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27368586 27368586 PRJNA724011_P_NODE_52643_length_355_cov_1.932624_g51620_i0 PRJNA724011 52643 355 1.932624 6.8608152 Thermoproteus sp. 2268139 Archaea Archaea 44.7 0.00423   NR MEZ0248580.1 2268139 g51620 i0 38 0.6 71 43 60 1 251 39 9 78 MEZ0248580.1 hypothetical protein [Thermoproteus sp.] diamond 213 44.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Thermoproteus Thermoproteus sp.
27442088 27442088 PRJNA724011_P_NODE_76423_length_285_cov_1.650943_g75400_i0 PRJNA724011 76423 285 1.650943 4.70518755 Staphylothermus 2279 Archaea Archaea 44.7 0.00858   NR WP_011839832.1 2280 g75400 i0 24.7 1.65263157894737 81 58 84.2 2 6 245 116 194 WP_011839832.1 DUF3782 domain-containing protein [Staphylothermus marinus] diamond 471 44.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Staphylothermus Staphylothermus marinus
27463185 27463185 PRJNA724011_P_NODE_95663_length_250_cov_0.870056_g94640_i0 PRJNA724011 95663 250 0.870056 2.17514 Pyrobaculum sp. 2004705 Archaea Archaea 42.4 0.0481   NR MFN3803591.1 2004705 g94640 i0 30.9 0.972 81 56 97.2 0 3 245 20 100 MFN3803591.1 DNA double-strand break repair nuclease NurA [Pyrobaculum sp.] diamond 243 42.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum sp.
28610082 28610082 PRJNA724011_P_NODE_95967_length_250_cov_0.870056_g94944_i0 PRJNA724011 95967 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 59.7 4.36e-8   NR WP_229768096.1 1670455 g94944 i0 40.2 4.824 82 45 98.4 2 249 4 464 541 WP_229768096.1 glycoside hydrolase family 3 N-terminal domain-containing protein [Sulfodiicoccus acidiphilus] diamond 1206 60.1 0.993344425956739 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfodiicoccus Sulfodiicoccus acidiphilus
28788879 28788879 PRJNA724011_P_NODE_38267_length_434_cov_1.698061_g37244_i0 PRJNA724011 38267 434 1.698061 7.36958474 Stygiolobus caldivivus 2824673 Archaea Archaea 65.9 1.26e-10   NR WP_221287698.1 2824673 g37244 i0 65.2 0.953917050691244 46 16 31.8 0 139 2 4 49 WP_221287698.1 RidA family protein [Stygiolobus caldivivus] diamond 414 65.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Stygiolobus Stygiolobus caldivivus
31031834 31031834 PRJNA724011_P_NODE_3115_length_1705_cov_10.254289_g2737_i0 PRJNA724011 3115 1705 10.254289 174.83562745 Vulcanisaeta sp. 2020871 Archaea Archaea 242 8.35e-70   NR MFP3236626.1 2020871 g2737 i0 34.6 0.731964809384164 416 261 72.5 7 1424 189 16 424 MFP3236626.1 aspartate aminotransferase family protein [Vulcanisaeta sp.] diamond 1248 242 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta sp.
31737543 31737543 PRJNA724011_P_NODE_5457_length_1343_cov_5.287402_g4835_i1 PRJNA724011 5457 1343 5.287402 71.00980886 Thermoprotei 183924 Archaea Archaea 242 2.6000000000000007e-71   NR WP_048078874.1 2275 g4835 i1 34.2 11.8056589724497 441 252 97.6 8 33 1343 4 410 WP_048078874.1 translation elongation factor EF-1 subunit alpha [Desulfurococcus mucosus] diamond 15855 243 0.995884773662551 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Desulfurococcus Desulfurococcus mucosus
32528874 32528874 PRJNA724011_P_NODE_5379_length_1352_cov_4.995309_g4835_i0 PRJNA724011 5379 1352 4.995309 67.53657768 Thermoprotei 183924 Archaea Archaea 248 1.6e-73   NR WP_148683570.1 683846 g4835 i0 34.2 10.8794378698225 441 249 97 10 1311 1 5 408 WP_148683570.1 translation elongation factor EF-1 subunit alpha [Fervidicoccus fontis] diamond 14709 249 0.995983935742972 Archaea   Thermoproteati Thermoproteota Thermoprotei Fervidicoccales Fervidicoccaceae Fervidicoccus Fervidicoccus fontis
32812199 32812199 PRJNA724011_P_NODE_87760_length_262_cov_1.222222_g86737_i0 PRJNA724011 87760 262 1.222222 3.20222164 root 1 Root_unresolved Root_unresolved 47.4 6.84e-4   NR WP_014025709.1 54252 g86737 i0 35.6 2.66793893129771 73 46 82.4 1 227 12 99 171 WP_014025709.1 CBS domain-containing protein [Pyrolobus fumarii] diamond 699 47.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Pyrodictiaceae Pyrolobus Pyrolobus fumarii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;