RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA724011" and tax_phylum = "Nematomorpha"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA724011 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
710791 710791 PRJNA724011_P_NODE_71001_length_298_cov_1.351111_g69978_i0 PRJNA724011 71001 298 1.351111 4.02631078 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 153 2.23e-45   NR XP_065324433.1 3053472 g69978 i0 72.7 15.4328859060403 99 27 99.7 0 1 297 1 99 XP_065324433.1 iron-sulfur cluster assembly scaffold protein IscU-like isoform X1 [Gordionus sp. m RMFG-2023] diamond 4599 153 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
12189650 12189650 PRJNA724011_P_NODE_102070_length_246_cov_0.890173_g101047_i0 PRJNA724011 102070 246 0.890173 2.18982558 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 76.8 1.32e-9   NTclustered gi|2733959807|ref|XM_065464329.1| 3053472 g101047 i0 90 1 60 4 24 2 4 62 143 85 PREDICTED: Gordionus sp. m RMFG-2023 dnaJ homolog subfamily C member 21-like (LOC135928013), transcript variant X2, mRNA blastn 246 76.8 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
28252194 28252194 PRJNA724011_P_NODE_27946_length_529_cov_1.717105_g26930_i0 PRJNA724011 27946 529 1.717105 9.08348545 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 60.5 4.29e-7   NR XP_065312583.1 3053472 g26930 i0 44.2 1.96786389413989 86 28 48.8 2 267 10 13 78 XP_065312583.1 fimbrin-like [Gordionus sp. m RMFG-2023] diamond 1041 60.5 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
28283704 28283704 PRJNA724011_P_NODE_89466_length_258_cov_2.486486_g88443_i0 PRJNA724011 89466 258 2.486486 6.41513388 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 48.9 3.03e-4   NR XP_065314646.1 3053472 g88443 i0 31.5 2.59302325581395 73 42 84.9 2 221 3 579 643 XP_065314646.1 uncharacterized protein LOC135923685 [Gordionus sp. m RMFG-2023] diamond 669 48.9 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
29104963 29104963 PRJNA724011_P_NODE_40788_length_416_cov_1.568513_g39765_i0 PRJNA724011 40788 416 1.568513 6.52501408 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 81.3 8.51e-17   NR XP_065325209.1 3053472 g39765 i0 38.1 0.814903846153846 113 70 81.5 0 27 365 1 113 XP_065325209.1 large ribosomal subunit protein P2-like [Gordionus sp. m RMFG-2023] diamond 339 81.3 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
29168165 29168165 PRJNA724011_P_NODE_54709_length_347_cov_2.109489_g53686_i0 PRJNA724011 54709 347 2.109489 7.31992683 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 45.4 0.0142   NR XP_065316404.1 3053472 g53686 i0 26.5 0.976945244956772 113 73 97.7 4 347 9 484 586 XP_065316404.1 cullin-associated NEDD8-dissociated protein 1-like isoform X3 [Gordionus sp. m RMFG-2023] diamond 339 45.4 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
29294244 29294244 PRJNA724011_P_NODE_37229_length_441_cov_13.937500_g36206_i0 PRJNA724011 37229 441 13.9375 61.464375 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 79.3 6.34e-16   NR XP_065315963.1 3053472 g36206 i0 36.9 2.21768707482993 103 65 70.1 0 403 95 15 117 XP_065315963.1 uncharacterized protein LOC135924784 [Gordionus sp. m RMFG-2023] diamond 978 79.3 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;