RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA724011" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA724011 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27315575 27315575 PRJNA724011_P_NODE_18943_length_679_cov_2.084158_g17938_i0 PRJNA724011 18943 679 2.084158 14.15143282 Bacillati 1783272 Bacteria Bacteria 100 3.39e-20   NR MDD5377084.1 2044595 g17938 i0 35.3 3.12812960235641 218 95 94.6 5 7 648 31 206 MDD5377084.1 RecQ family ATP-dependent DNA helicase [Candidatus Altimarinota bacterium] diamond 2124 100 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29672836 29672836 PRJNA724011_P_NODE_5430_length_1346_cov_5.438335_g4882_i0 PRJNA724011 5430 1346 5.438335 73.1999891 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 83.6 4.4e-13   NR MFA6090757.1 2044595 g4882 i0 21.8 0.911589895988113 409 285 89.2 11 37 1236 145 527 MFA6090757.1 SulP family inorganic anion transporter [Candidatus Altimarinota bacterium] diamond 1227 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29735996 29735996 PRJNA724011_P_NODE_18390_length_692_cov_2.200323_g17389_i0 PRJNA724011 18390 692 2.200323 15.22623516 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 57.4 1.13e-5   NR MCP4523361.1 2044595 g17389 i0 31 0.628612716763006 145 91 60.7 4 271 690 148 288 MCP4523361.1 ion transporter [Candidatus Altimarinota bacterium] diamond 435 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30905309 30905309 PRJNA724011_P_NODE_24074_length_581_cov_1.625984_g23059_i0 PRJNA724011 24074 581 1.625984 9.44696704 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 65.5 9.22e-9   NR MCP4523361.1 2044595 g23059 i0 31.7 0.846815834767642 164 110 84.7 1 538 47 139 300 MCP4523361.1 ion transporter [Candidatus Altimarinota bacterium] diamond 492 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;