contig_metadata
8 rows where bioproject = "PRJNA724011" and tax_phylum = "Calditrichota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23663494 | 23663494 | PRJNA724011_P_NODE_17439_length_716_cov_2.671851_g16447_i0 | PRJNA724011 | 17439 | 716 | 2.671851 | 19.13045316 | Calditrichia bacterium | 2268178 | Bacteria | Bacteria | 298 | 9.3e-93 | NR | MEE9117053.1 | 2268178 | g16447 | i0 | 60.9 | 8.97905027932961 | 238 | 89 | 99.7 | 1 | 1 | 714 | 289 | 522 | MEE9117053.1 selenide, water dikinase SelD [Calditrichia bacterium] | diamond | 6429 | 298 | 1 | Bacteria | Pseudomonadati | Calditrichota | Calditrichia | Calditrichia bacterium | |||||
| 29546657 | 29546657 | PRJNA724011_P_NODE_24730_length_571_cov_1.696787_g23714_i0 | PRJNA724011 | 24730 | 571 | 1.696787 | 9.68865377 | Calditrichia bacterium | 2268178 | Bacteria | Bacteria | 185 | 4.76e-53 | NR | MCK4560960.1 | 2268178 | g23714 | i0 | 45.1 | 1.02451838879159 | 195 | 102 | 99.8 | 1 | 571 | 2 | 204 | 398 | MCK4560960.1 polyamine aminopropyltransferase [Calditrichia bacterium] | diamond | 585 | 185 | 1 | Bacteria | Pseudomonadati | Calditrichota | Calditrichia | Calditrichia bacterium | |||||
| 30347477 | 30347477 | PRJNA724011_P_NODE_80292_length_277_cov_1.127451_g79269_i0 | PRJNA724011 | 80292 | 277 | 1.127451 | 3.12303927 | root | 1 | Root_unresolved | Root_unresolved | 64.7 | 9.93e-10 | NR | NOY76631.1 | 2212469 | g79269 | i0 | 47.6 | 1.34296028880866 | 63 | 32 | 67.1 | 1 | 1 | 186 | 339 | 401 | NOY76631.1 hypothetical protein [Calditrichota bacterium] | diamond | 372 | 64.7 | 1 | Bacteria | Pseudomonadati | Calditrichota | Calditrichota bacterium | ||||||
| 30905400 | 30905400 | PRJNA724011_P_NODE_87234_length_263_cov_1.215789_g86211_i0 | PRJNA724011 | 87234 | 263 | 1.215789 | 3.19752507 | Calditrichota bacterium | 2212469 | Bacteria | Bacteria | 52 | 2.48e-5 | NR | RMF59301.1 | 2212469 | g86211 | i0 | 36.4 | 0.878326996197719 | 77 | 44 | 87.8 | 2 | 232 | 2 | 38 | 109 | RMF59301.1 MAG: response regulator [Calditrichota bacterium] | diamond | 231 | 52 | 1 | Bacteria | Pseudomonadati | Calditrichota | Calditrichota bacterium | ||||||
| 31453174 | 31453174 | PRJNA724011_P_NODE_9496_length_1024_cov_2.526814_g8717_i0 | PRJNA724011 | 9496 | 1024 | 2.526814 | 25.87457536 | Bacteria | 2 | Bacteria | Bacteria | 83.6 | 1.64e-13 | NR | MCB9058609.1 | 2268178 | g8717 | i0 | 28.7 | 1.8779296875 | 254 | 142 | 71.8 | 9 | 952 | 218 | 43 | 266 | MCB9058609.1 protein kinase [Calditrichia bacterium] | diamond | 1923 | 83.6 | 1 | Bacteria | Pseudomonadati | Calditrichota | Calditrichia | Calditrichia bacterium | |||||
| 32138625 | 32138625 | PRJNA724011_P_NODE_66018_length_311_cov_2.012605_g64995_i0 | PRJNA724011 | 66018 | 311 | 2.012605 | 6.25920155 | Calditrichia bacterium | 2268178 | Bacteria | Bacteria | 43.5 | 0.0422 | NR | MCK5453018.1 | 2268178 | g64995 | i0 | 29.3 | 0.887459807073955 | 92 | 51 | 86.8 | 4 | 42 | 311 | 337 | 416 | MCK5453018.1 PAS domain-containing protein [Calditrichia bacterium] | diamond | 276 | 43.5 | 1 | Bacteria | Pseudomonadati | Calditrichota | Calditrichia | Calditrichia bacterium | |||||
| 32201909 | 32201909 | PRJNA724011_P_NODE_57618_length_337_cov_1.450758_g56595_i0 | PRJNA724011 | 57618 | 337 | 1.450758 | 4.88905446 | Calditrichota bacterium | 2212469 | Bacteria | Bacteria | 62.4 | 4.96e-10 | NR | MCB1058987.1 | 2212469 | g56595 | i0 | 58.8 | 2.59940652818991 | 51 | 21 | 45.4 | 0 | 336 | 184 | 41 | 91 | MCB1058987.1 RNA-binding protein [Calditrichota bacterium] | diamond | 876 | 62.4 | 1 | Bacteria | Pseudomonadati | Calditrichota | Calditrichota bacterium | ||||||
| 32328748 | 32328748 | PRJNA724011_P_NODE_47119_length_380_cov_1.299674_g46096_i0 | PRJNA724011 | 47119 | 380 | 1.299674 | 4.9387612 | Calditrichia bacterium | 2268178 | Bacteria | Bacteria | 42.4 | 0.0433 | NR | MEZ4764383.1 | 2268178 | g46096 | i0 | 41.5 | 0.323684210526316 | 41 | 24 | 32.4 | 0 | 31 | 153 | 3 | 43 | MEZ4764383.1 sigma 54-interacting transcriptional regulator [Calditrichia bacterium] | diamond | 123 | 42.4 | 1 | Bacteria | Pseudomonadati | Calditrichota | Calditrichia | Calditrichia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;