RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA724011", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA724011 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29515045 29515045 PRJNA724011_P_NODE_22430_length_608_cov_5.730841_g21417_i0 PRJNA724011 22430 608 5.730841 34.84351328 Synergistales bacterium 2268201 Bacteria Bacteria 51.6 3e-4   NR GHS94371.1 2268201 g21417 i0 38.3 0.463815789473684 94 47 41 4 295 47 70 163 GHS94371.1 hypothetical protein AGMMS50276_06870 [Synergistales bacterium] diamond 282 51.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
32550214 32550214 PRJNA724011_P_NODE_78959_length_279_cov_2.747573_g77936_i0 PRJNA724011 78959 279 2.747573 7.66572867 Candidatus Equadaptatus faecalis 3083093 Bacteria Bacteria 42.4 0.0379   NR MBQ0055330.1 3083093 g77936 i0 31.1 0.655913978494624 61 42 65.6 0 13 195 28 88 MBQ0055330.1 PqqD family protein [Candidatus Equadaptatus faecalis] diamond 183 42.4 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Candidatus Equadaptatus Candidatus Equadaptatus faecalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;