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contig_metadata

34 rows where bioproject = "PRJNA724011" and tax_kingdom = "Thermotogati"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 34 ✖

bioproject 1

  • PRJNA724011 · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3261811 3261811 PRJNA724011_P_NODE_26283_length_549_cov_2.579832_g25267_i0 PRJNA724011 26283 549 2.579832 14.16327768 Thermotoga caldifontis 1508419 Bacteria Bacteria 62.1 8.97e-5   NTclustered gi|597439397|dbj|AP014509.1| 1408159 g25267 i0 94.872 0.0710382513661202 39 2 7 0 149 187 240180 240218 Thermotoga caldifontis AZM44c09 DNA, complete genome blastn 39 62.1 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Thermotoga Thermotoga caldifontis
7089636 7089636 PRJNA724011_P_NODE_76246_length_285_cov_3.797170_g75223_i0 PRJNA724011 76246 285 3.79717 10.8219345 Deinococcus gobiensis 502394 Bacteria Bacteria 477 3.669999999999999e-130   NTclustered gi|379998737|gb|CP002191.1| 745776 g75223 i0 96.853 203.00701754386 286 8 100 1 1 285 112169 112454 Deinococcus gobiensis I-0, complete genome blastn 57857 477 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus gobiensis
8846805 8846805 PRJNA724011_P_NODE_2447_length_1857_cov_15.352578_g2111_i1 PRJNA724011 2447 1857 15.352578 285.09737345999997 Deinococcus 1298 Bacteria Bacteria 2804 0   NTclustered gi|470486828|ref|NR_076782.1| 502394 g2111 i1 94.035 310.893914916532 1861 92 99 17 4 1855 1851 1 Deinococcus gobiensis strain I-0 23S ribosomal RNA gene, complete sequence blastn 577330 2808 0.998575498575499 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus gobiensis
9638891 9638891 PRJNA724011_P_NODE_110288_length_241_cov_0.916667_g109265_i0 PRJNA724011 110288 241 0.916667 2.20916747 Thermus thermophilus 274 Bacteria Bacteria 274 4.2499999999999997e-69   NTclustered gi|333965676|gb|CP002777.1| 762633 g109265 i0 87.983 2.89211618257261 233 26 96 2 1 232 310476 310707 Thermus thermophilus SG0.5JP17-16, complete genome blastn 697 274 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
10914904 10914904 PRJNA724011_P_NODE_75029_length_288_cov_1.609302_g74006_i0 PRJNA724011 75029 288 1.609302 4.63478976 Deinococcus proteolyticus 55148 Bacteria Bacteria 65.8 3.42e-6   NTclustered gi|324314064|gb|CP002536.1| 693977 g74006 i0 91.489 0.163194444444444 47 4 16 0 107 153 1217543 1217589 Deinococcus proteolyticus MRP, complete genome blastn 47 65.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus proteolyticus
16013550 16013550 PRJNA724011_P_NODE_99033_length_248_cov_0.880000_g98010_i0 PRJNA724011 99033 248 0.88 2.1824 Deinococcus sp. VB142 3112952 Bacteria Bacteria 420 5.34e-113   NTclustered gi|2706837832|gb|CP149782.1| 3112952 g98010 i0 97.189 2.89516129032258 249 5 100 2 1 248 562687 562440 Deinococcus sp. VB142 chromosome 1, complete sequence blastn 718 420 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. VB142
19837514 19837514 PRJNA724011_P_NODE_35176_length_458_cov_1.937662_g34157_i0 PRJNA724011 35176 458 1.937662 8.87449196 Bacteria 2 Bacteria Bacteria 110 1.32e-25   NR MFN2321341.1 2026798 g34157 i0 79.1 11.1615720524017 67 14 43.9 0 251 451 3 69 MFN2321341.1 low specificity L-threonine aldolase [Trueperaceae bacterium] diamond 5112 110 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
19837776 19837776 PRJNA724011_P_NODE_75236_length_288_cov_1.190698_g74213_i0 PRJNA724011 75236 288 1.190698 3.42921024 Deinococcus aquaticus 328692 Bacteria Bacteria 326 1.42e-84   NTclustered gi|2444120906|gb|CP115165.1| 328692 g74213 i0 92.208 3.40625 231 16 80 2 59 288 789694 789923 Deinococcus aquaticus strain PB-314 chromosome, complete genome blastn 981 326 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aquaticus
20320221 20320221 PRJNA724011_P_NODE_18416_length_691_cov_11.880259_g17414_i0 PRJNA724011 18416 691 11.880259 82.09258969 Deinococcus 1298 Bacteria Bacteria 1142 0   NTclustered gi|470486828|ref|NR_076782.1| 502394 g17414 i0 97.741 203.261939218524 664 13 96 1 4 665 1851 1188 Deinococcus gobiensis strain I-0 23S ribosomal RNA gene, complete sequence blastn 140454 1142 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus gobiensis
21113444 21113444 PRJNA724011_P_NODE_77457_length_283_cov_1.214286_g76434_i0 PRJNA724011 77457 283 1.214286 3.43642938 Deinococcus yunweiensis 367282 Bacteria Bacteria 523 4.5999999999999983e-144   NTclustered gi|2890653062|gb|CP177252.1| 367282 g76434 i0 100 167.04593639576 283 0 100 0 1 283 2671584 2671866 Deinococcus yunweiensis strain KCTC 3955 chromosome, complete genome blastn 47274 523 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus yunweiensis
21596119 21596119 PRJNA724011_P_NODE_48937_length_371_cov_2.315436_g47914_i0 PRJNA724011 48937 371 2.315436 8.59026756 Bacteria 2 Bacteria Bacteria 686 0   NTclustered gi|155128|gb|J04639.1|TTHTAQP1A 271 g47914 i0 100 66.4474393530997 371 0 100 0 1 371 274 644 Thermus aquaticus DNA polymerase (PolI) gene blastn 24652 686 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
22387972 22387972 PRJNA724011_P_NODE_27638_length_532_cov_3.786492_g26622_i0 PRJNA724011 27638 532 3.786492 20.14413744 Deinococcus sp. AB2017081 3093660 Bacteria Bacteria 957 0   NTclustered gi|2636768990|gb|CP140098.1| 3093660 g26622 i0 99.245 415.385338345865 530 4 99 0 3 532 58233 57704 Deinococcus sp. AB2017081 chromosome, complete genome blastn 220985 957 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. AB2017081
22871253 22871253 PRJNA724011_P_NODE_106118_length_243_cov_0.905882_g105095_i0 PRJNA724011 106118 243 0.905882 2.20129326 Deinococcus 1298 Bacteria Bacteria 438 1.4399999999999996e-118   NTclustered gi|1751871007|dbj|AP021849.1| 57498 g105095 i0 99.177 191.362139917695 243 2 100 0 1 243 715104 715346 Deinococcus grandis ATCC 43672 DNA, complete genome blastn 46501 438 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus grandis
26935910 26935910 PRJNA724011_P_NODE_67482_length_307_cov_1.799145_g66459_i0 PRJNA724011 67482 307 1.799145 5.52337515 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 85.9 5.63e-17   NR WP_165143968.1 1755814 g66459 i0 45.3 5.65798045602606 106 46 94.8 3 13 303 153 255 WP_165143968.1 IGHMBP2 family helicase [Marinitoga sp. 38H-ov] diamond 1737 85.9 1 Bacteria   Thermotogati Thermotogota Thermotogae Petrotogales Petrotogaceae Marinitoga Marinitoga sp. 38H-ov
27178336 27178336 PRJNA724011_P_NODE_111782_length_229_cov_3.500000_g110759_i0 PRJNA724011 111782 229 3.5 8.015 Thermotogaceae bacterium 2268206 Bacteria Bacteria 42 0.0338   NR MDI3471901.1 2268206 g110759 i0 37 0.707423580786026 54 33 70.7 1 204 43 4 56 MDI3471901.1 uncharacterized protein [Thermotogaceae bacterium] diamond 162 42 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae   Thermotogaceae bacterium
27589376 27589376 PRJNA724011_P_NODE_32584_length_480_cov_1.464373_g31565_i0 PRJNA724011 32584 480 1.464373 7.0289904 Calidithermus terrae 1408545 Bacteria Bacteria 104 9.22e-23   NR WP_147372671.1 1408545 g31565 i0 43.1 1.76875 144 70 88.8 5 9 434 423 556 WP_147372671.1 penicillin acylase family protein, partial [Calidithermus terrae] diamond 849 104 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Calidithermus Calidithermus terrae
27873392 27873392 PRJNA724011_P_NODE_46065_length_385_cov_1.750000_g45042_i0 PRJNA724011 46065 385 1.75 6.7375 Kosmotoga pacifica 1330330 Bacteria Bacteria 44.7 0.0278   NR WP_245612731.1 1330330 g45042 i0 50 0.358441558441558 46 21 35.8 1 141 4 12 55 WP_245612731.1 deoxyribose-phosphate aldolase [Kosmotoga pacifica] diamond 138 44.7 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Kosmotoga Kosmotoga pacifica
28126135 28126135 PRJNA724011_P_NODE_84265_length_269_cov_1.000000_g83242_i0 PRJNA724011 84265 269 1 2.69 Deinococcus peraridilitoris 432329 Bacteria Bacteria 134 1.56e-37   NR WP_041232012.1 432329 g83242 i0 61.5 1.01486988847584 91 33 99.3 1 2 268 86 176 WP_041232012.1 SMI1/KNR4 family protein [Deinococcus peraridilitoris] diamond 273 134 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus peraridilitoris
28188874 28188874 PRJNA724011_P_NODE_19266_length_672_cov_1.908180_g18260_i0 PRJNA724011 19266 672 1.90818 12.8229696 Deinococcales bacterium 2478479 Bacteria Bacteria 86.7 4.07e-16   NR MEZ4631478.1 2478479 g18260 i0 28.7 6.72321428571429 216 126 96.4 4 23 670 22 209 MEZ4631478.1 sugar ABC transporter substrate-binding protein [Deinococcales bacterium] diamond 4518 86.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales     Deinococcales bacterium
28199376 28199376 PRJNA724011_P_NODE_72466_length_294_cov_1.723982_g71443_i0 PRJNA724011 72466 294 1.723982 5.06850708 Bacteria 2 Bacteria Bacteria 105 1.29e-24   NR HKI57866.1 2026798 g71443 i0 53.6 3.95918367346939 97 45 99 0 3 293 112 208 HKI57866.1 beta-ketoacyl-ACP synthase II [Trueperaceae bacterium] diamond 1164 106 0.990566037735849 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
28915107 28915107 PRJNA724011_P_NODE_61368_length_325_cov_1.214286_g60345_i0 PRJNA724011 61368 325 1.214286 3.9464295 Pseudothermotoga sp. 2033661 Bacteria Bacteria 115 1.7e-30   NR HOJ87808.1 2033661 g60345 i0 60.4 1.69846153846154 91 36 84 0 325 53 33 123 HOJ87808.1 glycine cleavage system protein GcvH [Pseudothermotoga sp.] diamond 552 115 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Pseudothermotoga Pseudothermotoga sp.
29515045 29515045 PRJNA724011_P_NODE_22430_length_608_cov_5.730841_g21417_i0 PRJNA724011 22430 608 5.730841 34.84351328 Synergistales bacterium 2268201 Bacteria Bacteria 51.6 3e-4   NR GHS94371.1 2268201 g21417 i0 38.3 0.463815789473684 94 47 41 4 295 47 70 163 GHS94371.1 hypothetical protein AGMMS50276_06870 [Synergistales bacterium] diamond 282 51.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
29546648 29546648 PRJNA724011_P_NODE_18490_length_690_cov_1.260940_g17487_i0 PRJNA724011 18490 690 1.26094 8.700486 Pseudothermotoga sp. 2033661 Bacteria Bacteria 49.3 0.00819   NR MEJ5229452.1 2033661 g17487 i0 34.7 1.53913043478261 98 51 38.3 3 52 315 478 572 MEJ5229452.1 ATP-binding protein [Pseudothermotoga sp.] diamond 1062 49.3 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Pseudothermotoga Pseudothermotoga sp.
29641207 29641207 PRJNA724011_P_NODE_44570_length_393_cov_1.675000_g43547_i0 PRJNA724011 44570 393 1.675 6.58275 Trueperaceae bacterium 2026798 Bacteria Bacteria 60.5 1.17e-7   NR MDF1522747.1 2026798 g43547 i0 29.7 1.98473282442748 128 86 97.7 1 391 8 304 427 MDF1522747.1 F0F1 ATP synthase subunit alpha [Trueperaceae bacterium] diamond 780 60.5 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
29999535 29999535 PRJNA724011_P_NODE_52311_length_357_cov_1.066901_g51288_i0 PRJNA724011 52311 357 1.066901 3.80883657 Thermotoga 2335 Bacteria Bacteria 53.5 2.08e-5   NR WP_041844430.1 126738 g51288 i0 37.5 2.6890756302521 80 49 67.2 1 98 337 229 307 WP_041844430.1 magnesium transporter [Thermotoga sp. RQ7] diamond 960 53.5 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Thermotoga Thermotoga sp. RQ7
30620795 30620795 PRJNA724011_P_NODE_64313_length_316_cov_1.716049_g63290_i0 PRJNA724011 64313 316 1.716049 5.42271484 Deinococcus peraridilitoris 432329 Bacteria Bacteria 72.4 4.4e-13   NR WP_041232012.1 432329 g63290 i0 37.9 0.977848101265823 103 59 93 2 294 1 6 108 WP_041232012.1 SMI1/KNR4 family protein [Deinococcus peraridilitoris] diamond 309 72.4 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus peraridilitoris
31252825 31252825 PRJNA724011_P_NODE_42355_length_406_cov_1.603604_g41332_i0 PRJNA724011 42355 406 1.603604 6.51063224 Thermotogaceae bacterium 2268206 Bacteria Bacteria 44.7 0.0381   NR MDN5359838.1 2268206 g41332 i0 28.4 0.701970443349754 95 65 68 1 48 323 214 308 MDN5359838.1 heat-inducible transcriptional repressor [Thermotogaceae bacterium] diamond 285 44.7 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae   Thermotogaceae bacterium
31326454 31326454 PRJNA724011_P_NODE_2675_length_1795_cov_9.968641_g2332_i0 PRJNA724011 2675 1795 9.968641 178.93710595 Bacteria 2 Bacteria Bacteria 267 1.18e-78   NR WP_273990980.1 328692 g2332 i0 35.7 6.48635097493036 499 293 80.6 6 1753 308 5 492 WP_273990980.1 factor-independent urate hydroxylase [Deinococcus aquaticus] diamond 11643 267 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aquaticus
31411028 31411028 PRJNA724011_P_NODE_39096_length_428_cov_1.529577_g38073_i0 PRJNA724011 39096 428 1.529577 6.54658956 Meiothermus sp. 1955249 Bacteria Bacteria 88.6 2.83e-17   NR MER3555365.1 1955249 g38073 i0 39.8 0.827102803738318 118 69 82.7 1 74 427 443 558 MER3555365.1 peptidase M16 [Meiothermus sp.] diamond 354 88.6 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
31790331 31790331 PRJNA724011_P_NODE_43297_length_400_cov_2.342508_g42274_i0 PRJNA724011 43297 400 2.342508 9.370032 Deinococcus piscis 394230 Bacteria Bacteria 101 4.77e-24   NR WP_189642814.1 394230 g42274 i0 52.4 0.63 84 40 63 0 22 273 90 173 WP_189642814.1 SMI1/KNR4 family protein [Deinococcus piscis] diamond 252 101 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus piscis
31800743 31800743 PRJNA724011_P_NODE_81297_length_274_cov_3.064677_g80274_i0 PRJNA724011 81297 274 3.064677 8.39721498 Bacteria 2 Bacteria Bacteria 50.8 6.7e-5   NR WP_041083630.1 1508420 g80274 i0 38.8 1.92700729927007 49 30 53.6 0 12 158 232 280 WP_041083630.1 ACP S-malonyltransferase [Thermotoga profunda] diamond 528 51.2 0.9921875 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Thermotoga Thermotoga profunda
32297181 32297181 PRJNA724011_P_NODE_63539_length_318_cov_2.171429_g62516_i0 PRJNA724011 63539 318 2.171429 6.90514422 Deinococcus roseus 392414 Bacteria Bacteria 94 9.68e-20   NR WP_229684590.1 392414 g62516 i0 70.2 0.537735849056604 57 17 53.8 0 142 312 352 408 WP_229684590.1 glycosyl hydrolase family 18 protein [Deinococcus roseus] diamond 171 94 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
32550214 32550214 PRJNA724011_P_NODE_78959_length_279_cov_2.747573_g77936_i0 PRJNA724011 78959 279 2.747573 7.66572867 Candidatus Equadaptatus faecalis 3083093 Bacteria Bacteria 42.4 0.0379   NR MBQ0055330.1 3083093 g77936 i0 31.1 0.655913978494624 61 42 65.6 0 13 195 28 88 MBQ0055330.1 PqqD family protein [Candidatus Equadaptatus faecalis] diamond 183 42.4 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Candidatus Equadaptatus Candidatus Equadaptatus faecalis
32906556 32906556 PRJNA724011_P_NODE_15280_length_777_cov_2.738636_g14319_i0 PRJNA724011 15280 777 2.738636 21.27920172 root 1 Root_unresolved Root_unresolved 154 5.13e-40   NR WP_370533121.1 275 g14319 i0 44.4 15.4555984555985 207 107 79.5 3 708 91 72 271 WP_370533121.1 DEAD/DEAH box helicase, partial [Thermus sp.] diamond 12009 154 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;