contig_metadata
54 rows where bioproject = "PRJNA724011", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3745602 | 3745602 | PRJNA724011_P_NODE_37403_length_440_cov_2.918256_g36380_i0 | PRJNA724011 | 37403 | 440 | 2.918256 | 12.8403264 | Bacteria | 2 | Bacteria | Bacteria | 201 | 2.51e-58 | NR | MDA3948758.1 | 28185 | g36380 | i0 | 71 | 37.1727272727273 | 138 | 40 | 94.1 | 0 | 440 | 27 | 486 | 623 | MDA3948758.1 glycoside hydrolase family 15 protein [Spirochaeta sp.] | diamond | 16356 | 203 | 0.990147783251232 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta sp. | ||
| 4538719 | 4538719 | PRJNA724011_P_NODE_100164_length_247_cov_0.885057_g99141_i0 | PRJNA724011 | 100164 | 247 | 0.885057 | 2.18609079 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 129 | 1.45e-36 | NR | MCB1159828.1 | 2026757 | g99141 | i0 | 72.2 | 0.959514170040486 | 79 | 22 | 96 | 0 | 246 | 10 | 34 | 112 | MCB1159828.1 peptidylprolyl isomerase [Leptospiraceae bacterium] | diamond | 237 | 129 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 10914422 | 10914422 | PRJNA724011_P_NODE_109069_length_241_cov_1.726190_g108046_i0 | PRJNA724011 | 109069 | 241 | 1.72619 | 4.1601179 | root | 1 | Root_unresolved | Root_unresolved | 118 | 7.17e-29 | NR | MCE9501212.1 | 178 | g108046 | i0 | 74.4 | 25.2821576763485 | 78 | 20 | 97.1 | 0 | 239 | 6 | 620 | 697 | MCE9501212.1 sodium-translocating pyrophosphatase [Leptospira sp.] | diamond | 6093 | 119 | 0.991596638655462 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 14739418 | 14739418 | PRJNA724011_P_NODE_105092_length_244_cov_0.900585_g104069_i0 | PRJNA724011 | 105092 | 244 | 0.900585 | 2.1974274 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 153 | 3.099999999999999e-43 | NR | HBK59060.1 | 1898206 | g104069 | i0 | 92.6 | 2.95081967213115 | 81 | 6 | 99.6 | 0 | 244 | 2 | 163 | 243 | HBK59060.1 methylmalonyl Co-A mutase-associated GTPase MeaB [Spirochaetaceae bacterium] | diamond | 720 | 153 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 19837390 | 19837390 | PRJNA724011_P_NODE_176_length_4730_cov_3.600387_g132_i0 | PRJNA724011 | 176 | 4730 | 3.600387 | 170.2983051 | Bacteria | 2 | Bacteria | Bacteria | 74.7 | 1.75e-10 | NR | MCL2480986.1 | 1898206 | g132 | i0 | 33.3 | 0.76553911205074 | 135 | 80 | 8.6 | 3 | 4083 | 4487 | 91 | 215 | MCL2480986.1 30S ribosomal protein S3 [Spirochaetaceae bacterium] | diamond | 3621 | 74.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 19837823 | 19837823 | PRJNA724011_P_NODE_81536_length_274_cov_1.527363_g80513_i0 | PRJNA724011 | 81536 | 274 | 1.527363 | 4.18497462 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 62.1 | 4.18e-5 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g80513 | i0 | 92.857 | 0.153284671532847 | 42 | 3 | 15 | 0 | 199 | 240 | 3099605 | 3099564 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 42 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 26925568 | 26925568 | PRJNA724011_P_NODE_39122_length_428_cov_1.056338_g38099_i0 | PRJNA724011 | 39122 | 428 | 1.056338 | 4.52112664 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 68.2 | 1.72e-10 | NR | GHV76060.1 | 2053615 | g38099 | i0 | 48.1 | 1.5981308411215 | 77 | 28 | 49.8 | 3 | 103 | 315 | 94 | 164 | GHV76060.1 carbonic anhydrase [Spirochaetia bacterium] | diamond | 684 | 68.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 27252145 | 27252145 | PRJNA724011_P_NODE_81783_length_273_cov_2.800000_g80760_i0 | PRJNA724011 | 81783 | 273 | 2.8 | 7.644 | FCB group | 1783270 | Bacteria | Bacteria | 130 | 5.83e-35 | NR | WP_076489348.1 | 159291 | g80760 | i0 | 62.9 | 10.8351648351648 | 89 | 33 | 97.8 | 0 | 5 | 271 | 107 | 195 | WP_076489348.1 HAD-IIA family hydrolase [Alkalispirochaeta americana] | diamond | 2958 | 131 | 0.99236641221374 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Alkalispirochaeta | Alkalispirochaeta americana | ||
| 27589447 | 27589447 | PRJNA724011_P_NODE_81284_length_274_cov_3.870647_g80261_i0 | PRJNA724011 | 81284 | 274 | 3.870647 | 10.60557278 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 53.9 | 6.33e-6 | NR | MFH0977623.1 | 2202144 | g80261 | i0 | 53.1 | 1.01824817518248 | 49 | 19 | 49.3 | 1 | 270 | 136 | 60 | 108 | MFH0977623.1 hypothetical protein [Spirochaetota bacterium] | diamond | 279 | 53.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 27841766 | 27841766 | PRJNA724011_P_NODE_83184_length_271_cov_1.161616_g82161_i0 | PRJNA724011 | 83184 | 271 | 1.161616 | 3.14797936 | Treponema sp. | 166 | Bacteria | Bacteria | 50.4 | 1.04e-4 | NR | MCL2266568.1 | 166 | g82161 | i0 | 58.7 | 0.509225092250922 | 46 | 19 | 50.9 | 0 | 159 | 22 | 482 | 527 | MCL2266568.1 ankyrin repeat domain-containing protein [Treponema sp.] | diamond | 138 | 50.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27852135 | 27852135 | PRJNA724011_P_NODE_18744_length_684_cov_1.757774_g17739_i0 | PRJNA724011 | 18744 | 684 | 1.757774 | 12.02317416 | root | 1 | Root_unresolved | Root_unresolved | 50.4 | 0.00209 | NR | MBR6153969.1 | 166 | g17739 | i0 | 51 | 6.99122807017544 | 51 | 25 | 22.4 | 0 | 527 | 679 | 179 | 229 | MBR6153969.1 LON peptidase substrate-binding domain-containing protein [Treponema sp.] | diamond | 4782 | 50.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27904702 | 27904702 | PRJNA724011_P_NODE_19545_length_666_cov_4.032040_g18539_i0 | PRJNA724011 | 19545 | 666 | 4.03204 | 26.8533864 | Treponema sp. | 166 | Bacteria | Bacteria | 67.4 | 1.63e-9 | NR | MBQ9205232.1 | 166 | g18539 | i0 | 36.9 | 2.23423423423423 | 122 | 70 | 55 | 2 | 386 | 21 | 70 | 184 | MBQ9205232.1 CAP domain-containing protein [Treponema sp.] | diamond | 1488 | 67.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27936672 | 27936672 | PRJNA724011_P_NODE_36905_length_444_cov_1.746631_g35882_i0 | PRJNA724011 | 36905 | 444 | 1.746631 | 7.75504164 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 55.1 | 1.51e-5 | NR | MDD3902469.1 | 1972642 | g35882 | i0 | 31.5 | 0.858108108108108 | 127 | 74 | 79.1 | 5 | 14 | 364 | 3 | 126 | MDD3902469.1 FAD-dependent oxidoreductase [Sphaerochaeta sp.] | diamond | 381 | 55.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 27936748 | 27936748 | PRJNA724011_P_NODE_83905_length_269_cov_1.979592_g82882_i0 | PRJNA724011 | 83905 | 269 | 1.979592 | 5.32510248 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 47 | 0.00132 | NR | MDH5717300.1 | 2053615 | g82882 | i0 | 43.6 | 1.31598513011152 | 55 | 31 | 61.3 | 0 | 248 | 84 | 116 | 170 | MDH5717300.1 tetratricopeptide repeat protein [Spirochaetia bacterium] | diamond | 354 | 47 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 27999904 | 27999904 | PRJNA724011_P_NODE_24825_length_569_cov_5.729839_g23809_i0 | PRJNA724011 | 24825 | 569 | 5.729839 | 32.60278391 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 55.5 | 3.31e-5 | NR | MBO5237082.1 | 1898206 | g23809 | i0 | 25 | 1.68189806678383 | 164 | 109 | 85.4 | 3 | 35 | 520 | 60 | 211 | MBO5237082.1 ankyrin repeat domain-containing protein [Spirochaetaceae bacterium] | diamond | 957 | 55.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 28062745 | 28062745 | PRJNA724011_P_NODE_12245_length_886_cov_3.767528_g11360_i0 | PRJNA724011 | 12245 | 886 | 3.767528 | 33.38029808 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 126 | 5.88e-32 | NR | MCB1142831.1 | 2026757 | g11360 | i0 | 43.8 | 0.487584650112867 | 144 | 77 | 47.4 | 1 | 481 | 62 | 5 | 148 | MCB1142831.1 DUF2062 domain-containing protein [Leptospiraceae bacterium] | diamond | 432 | 126 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 28283588 | 28283588 | PRJNA724011_P_NODE_14186_length_813_cov_2.494595_g13255_i0 | PRJNA724011 | 14186 | 813 | 2.494595 | 20.28105735 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 57.8 | 2.07e-5 | NR | MDD3902469.1 | 1972642 | g13255 | i0 | 32.3 | 0.468634686346863 | 127 | 73 | 43.2 | 5 | 799 | 449 | 3 | 126 | MDD3902469.1 FAD-dependent oxidoreductase [Sphaerochaeta sp.] | diamond | 381 | 57.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 28315537 | 28315537 | PRJNA724011_P_NODE_44786_length_392_cov_1.369906_g43763_i0 | PRJNA724011 | 44786 | 392 | 1.369906 | 5.37003152 | Candidatus Ornithospirochaeta stercorigallinarum | 2840898 | Bacteria | Bacteria | 69.7 | 5.74e-11 | NR | HIS14589.1 | 2840898 | g43763 | i0 | 35 | 3.75765306122449 | 123 | 61 | 93.4 | 3 | 373 | 8 | 167 | 271 | HIS14589.1 redox-regulated ATPase YchF [Candidatus Ornithospirochaeta stercorigallinarum] | diamond | 1473 | 69.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Candidatus Ornithospirochaeta | Candidatus Ornithospirochaeta stercorigallinarum | ||
| 28610045 | 28610045 | PRJNA724011_P_NODE_23427_length_591_cov_4.581081_g22412_i0 | PRJNA724011 | 23427 | 591 | 4.581081 | 27.07418871 | Leptospira | 171 | Bacteria | Bacteria | 48.1 | 0.00469 | NR | WP_135762925.1 | 2484901 | g22412 | i0 | 25 | 3.06598984771574 | 124 | 79 | 62.9 | 2 | 500 | 129 | 2 | 111 | WP_135762925.1 DUF6962 family protein [Leptospira ilyithenensis] | diamond | 1812 | 48.5 | 0.991752577319588 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira ilyithenensis | ||
| 28631384 | 28631384 | PRJNA724011_P_NODE_16967_length_728_cov_2.157252_g15982_i0 | PRJNA724011 | 16967 | 728 | 2.157252 | 15.70479456 | Leptospirales bacterium | 2604146 | Bacteria | Bacteria | 46.6 | 0.00983 | NR | MBL8018365.1 | 2604146 | g15982 | i0 | 57.1 | 0.144230769230769 | 35 | 15 | 14.4 | 0 | 693 | 589 | 29 | 63 | MBL8018365.1 cysteine rich repeat-containing protein [Leptospirales bacterium] | diamond | 105 | 46.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospirales bacterium | ||||
| 28631478 | 28631478 | PRJNA724011_P_NODE_87267_length_263_cov_1.215789_g86244_i0 | PRJNA724011 | 87267 | 263 | 1.215789 | 3.19752507 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 42.7 | 0.0448 | NR | HQL81226.1 | 2202144 | g86244 | i0 | 37.1 | 0.707224334600761 | 62 | 36 | 67.3 | 1 | 181 | 5 | 10 | 71 | HQL81226.1 class I SAM-dependent methyltransferase [Spirochaetota bacterium] | diamond | 186 | 42.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28662850 | 28662850 | PRJNA724011_P_NODE_16547_length_739_cov_3.893393_g15571_i0 | PRJNA724011 | 16547 | 739 | 3.893393 | 28.77217427 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 74.3 | 6.8e-12 | NR | MBK7054861.1 | 2026757 | g15571 | i0 | 43.2 | 0.450608930987821 | 111 | 59 | 45.1 | 3 | 739 | 407 | 126 | 232 | MBK7054861.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 333 | 74.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 28757476 | 28757476 | PRJNA724011_P_NODE_96507_length_249_cov_1.312500_g95484_i0 | PRJNA724011 | 96507 | 249 | 1.3125 | 3.268125 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 56.2 | 6.78e-7 | NR | MBI40340.1 | 2026757 | g95484 | i0 | 39.3 | 0.734939759036145 | 61 | 37 | 73.5 | 0 | 248 | 66 | 38 | 98 | MBI40340.1 cyclic nucleotide-binding protein [Leptospiraceae bacterium] | diamond | 183 | 56.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 28830917 | 28830917 | PRJNA724011_P_NODE_111808_length_229_cov_2.871795_g110785_i0 | PRJNA724011 | 111808 | 229 | 2.871795 | 6.57641055 | root | 1 | Root_unresolved | Root_unresolved | 50.4 | 5.85e-5 | NR | MBR0031804.1 | 166 | g110785 | i0 | 39.1 | 3.20960698689956 | 64 | 39 | 83.8 | 0 | 227 | 36 | 268 | 331 | MBR0031804.1 ankyrin repeat domain-containing protein [Treponema sp.] | diamond | 735 | 50.8 | 0.992125984251969 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29010496 | 29010496 | PRJNA724011_P_NODE_50648_length_364_cov_1.020619_g49625_i0 | PRJNA724011 | 50648 | 364 | 1.020619 | 3.71505316 | Leptospira interrogans str. 2 | 173 | Bacteria | Bacteria | 42.4 | 0.0429 | NR | EMM79905.1 | 1001590 | g49625 | i0 | 28.4 | 0.782967032967033 | 95 | 52 | 75.8 | 3 | 9 | 284 | 19 | 100 | EMM79905.1 hypothetical protein LEP1GSC037_4770 [Leptospira interrogans str. 2006001854] | diamond | 285 | 42.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira interrogans | ||
| 29178480 | 29178480 | PRJNA724011_P_NODE_107529_length_242_cov_1.479290_g106506_i0 | PRJNA724011 | 107529 | 242 | 1.47929 | 3.5798818 | root | 1 | Root_unresolved | Root_unresolved | 55.1 | 1.57e-6 | NR | MDR2576344.1 | 166 | g106506 | i0 | 50 | 3.3099173553719 | 44 | 22 | 54.5 | 0 | 241 | 110 | 322 | 365 | MDR2576344.1 CAP domain-containing protein [Treponema sp.] | diamond | 801 | 55.5 | 0.992792792792793 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29199669 | 29199669 | PRJNA724011_P_NODE_13429_length_840_cov_2.409387_g12512_i0 | PRJNA724011 | 13429 | 840 | 2.409387 | 20.2388508 | Treponema sp. | 166 | Bacteria | Bacteria | 80.9 | 4.46e-13 | NR | MCR5763801.1 | 166 | g12512 | i0 | 47.2 | 0.317857142857143 | 89 | 39 | 31.8 | 2 | 284 | 18 | 503 | 583 | MCR5763801.1 response regulator [Treponema sp.] | diamond | 267 | 80.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29830966 | 29830966 | PRJNA724011_P_NODE_41111_length_414_cov_1.568915_g40088_i0 | PRJNA724011 | 41111 | 414 | 1.568915 | 6.4953081 | Treponema sp. | 166 | Bacteria | Bacteria | 52 | 1.26e-4 | NR | MDR1787852.1 | 166 | g40088 | i0 | 54 | 0.36231884057971 | 50 | 20 | 36.2 | 1 | 408 | 259 | 157 | 203 | MDR1787852.1 CAP domain-containing protein [Treponema sp.] | diamond | 150 | 52 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 29862530 | 29862530 | PRJNA724011_P_NODE_16931_length_729_cov_1.670732_g15948_i0 | PRJNA724011 | 16931 | 729 | 1.670732 | 12.17963628 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 66.6 | 1.17e-8 | NR | MBN1525752.1 | 2026792 | g15948 | i0 | 29 | 0.753086419753086 | 183 | 114 | 73.7 | 7 | 140 | 676 | 138 | 308 | MBN1525752.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Spirochaetales bacterium] | diamond | 549 | 66.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 29894264 | 29894264 | PRJNA724011_P_NODE_100051_length_247_cov_0.885057_g99028_i0 | PRJNA724011 | 100051 | 247 | 0.885057 | 2.18609079 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 64.3 | 9.57e-10 | NR | MCB1139649.1 | 2026757 | g99028 | i0 | 38.6 | 1.0080971659919 | 83 | 50 | 99.6 | 1 | 2 | 247 | 249 | 331 | MCB1139649.1 ion transporter [Leptospiraceae bacterium] | diamond | 249 | 64.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 29925961 | 29925961 | PRJNA724011_P_NODE_66111_length_311_cov_1.390756_g65088_i0 | PRJNA724011 | 66111 | 311 | 1.390756 | 4.32525116 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 56.2 | 1.44e-6 | NR | MEI6386064.1 | 2202144 | g65088 | i0 | 64.3 | 2.83601286173633 | 42 | 14 | 40.5 | 1 | 185 | 310 | 9 | 49 | MEI6386064.1 FAD-dependent oxidoreductase [Spirochaetota bacterium] | diamond | 882 | 56.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30020672 | 30020672 | PRJNA724011_P_NODE_108711_length_242_cov_0.911243_g107688_i0 | PRJNA724011 | 108711 | 242 | 0.911243 | 2.20520806 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 65.1 | 1.77e-10 | NR | MDH7554994.1 | 2202144 | g107688 | i0 | 40.6 | 4.73553719008264 | 64 | 38 | 79.3 | 0 | 50 | 241 | 132 | 195 | MDH7554994.1 ribonuclease HI family protein [Spirochaetota bacterium] | diamond | 1146 | 65.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 30188823 | 30188823 | PRJNA724011_P_NODE_16252_length_747_cov_5.905045_g15278_i0 | PRJNA724011 | 16252 | 747 | 5.905045 | 44.11068615 | Spirochaetia | 203692 | Bacteria | Bacteria | 94 | 2.53e-19 | NR | WP_029408900.1 | 409322 | g15278 | i0 | 33.2 | 2.76305220883534 | 190 | 114 | 74.3 | 5 | 186 | 740 | 29 | 210 | WP_029408900.1 CAP domain-containing protein [Treponema pedis] | diamond | 2064 | 94 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pedis | ||
| 30209939 | 30209939 | PRJNA724011_P_NODE_84452_length_268_cov_1.589744_g83429_i0 | PRJNA724011 | 84452 | 268 | 1.589744 | 4.26051392 | Brachyspira pilosicoli | 52584 | Bacteria | Bacteria | 44.3 | 0.0148 | NR | WP_219677442.1 | 52584 | g83429 | i0 | 32.5 | 2.49626865671642 | 83 | 55 | 92.9 | 1 | 267 | 19 | 678 | 759 | WP_219677442.1 ankyrin repeat domain-containing protein [Brachyspira pilosicoli] | diamond | 669 | 44.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira pilosicoli | ||
| 30220473 | 30220473 | PRJNA724011_P_NODE_97032_length_249_cov_0.875000_g96009_i0 | PRJNA724011 | 97032 | 249 | 0.875 | 2.17875 | Bacteria | 2 | Bacteria | Bacteria | 67.8 | 6.25e-11 | NR | MBQ7167640.1 | 166 | g96009 | i0 | 41.7 | 14.1566265060241 | 84 | 44 | 100 | 2 | 249 | 1 | 679 | 758 | MBQ7167640.1 leucine--tRNA ligase [Treponema sp.] | diamond | 3525 | 67.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30252300 | 30252300 | PRJNA724011_P_NODE_107772_length_242_cov_0.911243_g106749_i0 | PRJNA724011 | 107772 | 242 | 0.911243 | 2.20520806 | root | 1 | Root_unresolved | Root_unresolved | 46.2 | 0.00224 | NR | OHD11179.1 | 1802174 | g106749 | i0 | 41.5 | 1.48760330578512 | 53 | 31 | 65.7 | 0 | 217 | 59 | 802 | 854 | OHD11179.1 MAG: hypothetical protein A2Y41_07365 [Spirochaetes bacterium GWB1_36_13] | diamond | 360 | 46.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetes bacterium GWB1_36_13 | ||||||
| 30905325 | 30905325 | PRJNA724011_P_NODE_33254_length_474_cov_1.643392_g32235_i0 | PRJNA724011 | 33254 | 474 | 1.643392 | 7.78967808 | Leptospira stimsonii | 2202203 | Bacteria | Bacteria | 82.8 | 2.94e-15 | NR | WP_167883772.1 | 2202203 | g32235 | i0 | 40.4 | 1.44303797468354 | 114 | 67 | 72.2 | 1 | 469 | 128 | 255 | 367 | WP_167883772.1 ankyrin repeat domain-containing protein [Leptospira stimsonii] | diamond | 684 | 82.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira stimsonii | ||
| 31094699 | 31094699 | PRJNA724011_P_NODE_12435_length_879_cov_1.836228_g11545_i0 | PRJNA724011 | 12435 | 879 | 1.836228 | 16.14044412 | Leptospira bandrabouensis | 2484903 | Bacteria | Bacteria | 62.4 | 4.25e-7 | NR | WP_238777145.1 | 2484903 | g11545 | i0 | 25.6 | 1.16723549488055 | 172 | 123 | 57 | 3 | 604 | 104 | 106 | 277 | WP_238777145.1 ankyrin repeat domain-containing protein [Leptospira bandrabouensis] | diamond | 1026 | 62.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira bandrabouensis | ||
| 31126004 | 31126004 | PRJNA724011_P_NODE_19495_length_667_cov_2.809764_g18489_i0 | PRJNA724011 | 19495 | 667 | 2.809764 | 18.74112588 | Treponema sp. | 166 | Bacteria | Bacteria | 73.9 | 2.61e-11 | NR | MBO7638336.1 | 166 | g18489 | i0 | 39 | 0.553223388305847 | 123 | 58 | 52.6 | 3 | 363 | 13 | 288 | 399 | MBO7638336.1 response regulator [Treponema sp.] | diamond | 369 | 73.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 31189224 | 31189224 | PRJNA724011_P_NODE_44875_length_391_cov_2.650943_g43852_i0 | PRJNA724011 | 44875 | 391 | 2.650943 | 10.36518713 | Treponema sp. | 166 | Bacteria | Bacteria | 44.3 | 0.0483 | NR | MDR1419958.1 | 166 | g43852 | i0 | 32 | 0.790281329923274 | 103 | 65 | 78.3 | 3 | 345 | 40 | 82 | 180 | MDR1419958.1 HD domain-containing protein [Treponema sp.] | diamond | 309 | 44.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 31284311 | 31284311 | PRJNA724011_P_NODE_15515_length_770_cov_2.355811_g14550_i0 | PRJNA724011 | 15515 | 770 | 2.355811 | 18.1397447 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 118 | 6.62e-28 | NR | MDC7242197.1 | 2026792 | g14550 | i0 | 32.7 | 0.798701298701299 | 205 | 136 | 79.9 | 1 | 759 | 145 | 67 | 269 | MDC7242197.1 cyclic nucleotide-binding domain-containing protein [Spirochaetales bacterium] | diamond | 615 | 118 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 31421388 | 31421388 | PRJNA724011_P_NODE_52276_length_357_cov_1.327465_g51253_i0 | PRJNA724011 | 52276 | 357 | 1.327465 | 4.73905005 | root | 1 | Root_unresolved | Root_unresolved | 156 | 4.57e-43 | NR | MDR1506793.1 | 166 | g51253 | i0 | 59.5 | 8.84873949579832 | 116 | 47 | 97.5 | 0 | 8 | 355 | 124 | 239 | MDR1506793.1 aspartate aminotransferase family protein [Treponema sp.] | diamond | 3159 | 157 | 0.993630573248408 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 31537711 | 31537711 | PRJNA724011_P_NODE_54556_length_348_cov_1.127273_g53533_i0 | PRJNA724011 | 54556 | 348 | 1.127273 | 3.92291004 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 92.4 | 1.09e-19 | NR | MBN1897484.1 | 2202144 | g53533 | i0 | 51.7 | 2.30172413793103 | 89 | 42 | 76.7 | 1 | 268 | 2 | 4 | 91 | MBN1897484.1 histone deacetylase [Spirochaetota bacterium] | diamond | 801 | 92.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 31790357 | 31790357 | PRJNA724011_P_NODE_62637_length_321_cov_1.342742_g61614_i0 | PRJNA724011 | 62637 | 321 | 1.342742 | 4.31020182 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 72.8 | 2.52e-12 | NR | HMV79507.1 | 2026757 | g61614 | i0 | 40.2 | 1.62616822429907 | 87 | 49 | 81.3 | 2 | 57 | 317 | 382 | 465 | HMV79507.1 kelch repeat-containing protein [Leptospiraceae bacterium] | diamond | 522 | 72.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 31822061 | 31822061 | PRJNA724011_P_NODE_80257_length_277_cov_1.132353_g79234_i0 | PRJNA724011 | 80257 | 277 | 1.132353 | 3.13661781 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 61.6 | 1.22e-8 | NR | MBN1409614.1 | 2026792 | g79234 | i0 | 54.3 | 0.498194945848375 | 46 | 21 | 49.8 | 0 | 276 | 139 | 120 | 165 | MBN1409614.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Spirochaetales bacterium] | diamond | 138 | 61.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 31853704 | 31853704 | PRJNA724011_P_NODE_53737_length_351_cov_1.381295_g52714_i0 | PRJNA724011 | 53737 | 351 | 1.381295 | 4.84834545 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 56.2 | 2.48e-6 | NR | MBQ3922691.1 | 2026792 | g52714 | i0 | 32.6 | 0.786324786324786 | 92 | 55 | 78.6 | 2 | 351 | 76 | 557 | 641 | MBQ3922691.1 translation initiation factor IF-2 [Spirochaetales bacterium] | diamond | 276 | 56.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 31948657 | 31948657 | PRJNA724011_P_NODE_96337_length_249_cov_1.727273_g95314_i0 | PRJNA724011 | 96337 | 249 | 1.727273 | 4.30090977 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 43.5 | 0.0208 | NR | MDD4220450.1 | 2791017 | g95314 | i0 | 45.9 | 0.734939759036145 | 61 | 31 | 71.1 | 1 | 181 | 5 | 39 | 99 | MDD4220450.1 leucyl aminopeptidase [Sphaerochaetaceae bacterium] | diamond | 183 | 43.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 32012056 | 32012056 | PRJNA724011_P_NODE_75878_length_286_cov_2.154930_g74855_i0 | PRJNA724011 | 75878 | 286 | 2.15493 | 6.1630998 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 66.6 | 2.47e-10 | NR | MCU0821199.1 | 2202144 | g74855 | i0 | 60 | 4.24825174825175 | 55 | 22 | 57.7 | 0 | 286 | 122 | 532 | 586 | MCU0821199.1 acetate--CoA ligase [Spirochaetota bacterium] | diamond | 1215 | 66.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 32012057 | 32012057 | PRJNA724011_P_NODE_76278_length_285_cov_2.636792_g75255_i0 | PRJNA724011 | 76278 | 285 | 2.636792 | 7.5148572 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 57.8 | 2.58e-7 | NR | MBN1524513.1 | 2026792 | g75255 | i0 | 43.4 | 0.873684210526316 | 83 | 40 | 87.4 | 2 | 15 | 263 | 223 | 298 | MBN1524513.1 VWA domain-containing protein [Spirochaetales bacterium] | diamond | 249 | 57.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 32043607 | 32043607 | PRJNA724011_P_NODE_26398_length_548_cov_1.823158_g25382_i0 | PRJNA724011 | 26398 | 548 | 1.823158 | 9.99090584 | Brachyspira sp. G79 | 1358104 | Bacteria | Bacteria | 77.4 | 4.64e-14 | NR | WP_096736838.1 | 1358104 | g25382 | i0 | 29.6 | 6.77737226277372 | 179 | 80 | 98 | 4 | 540 | 4 | 33 | 165 | WP_096736838.1 guanylate kinase [Brachyspira sp. G79] | diamond | 3714 | 77.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira sp. G79 | ||
| 32075312 | 32075312 | PRJNA724011_P_NODE_7458_length_1160_cov_2.848206_g6785_i0 | PRJNA724011 | 7458 | 1160 | 2.848206 | 33.0391896 | Spirochaeta thermophila | 154 | Bacteria | Bacteria | 78.2 | 1.79e-12 | NR | WP_014625618.1 | 154 | g6785 | i0 | 36.5 | 1.03448275862069 | 126 | 71 | 32.1 | 3 | 576 | 205 | 2 | 120 | WP_014625618.1 response regulator transcription factor [Spirochaeta thermophila] | diamond | 1200 | 78.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Winmispirales | Winmispiraceae | Winmispira | Winmispira thermophila | ||
| 32170368 | 32170368 | PRJNA724011_P_NODE_1118_length_2453_cov_9.847899_g935_i0 | PRJNA724011 | 1118 | 2453 | 9.847899 | 241.56896247 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 50.4 | 0.0244 | NR | HMY67815.1 | 2026757 | g935 | i0 | 30.1 | 0.325315939665715 | 133 | 78 | 15.8 | 5 | 124 | 510 | 34 | 155 | HMY67815.1 C2 family cysteine protease [Leptospiraceae bacterium] | diamond | 798 | 50.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 32612866 | 32612866 | PRJNA724011_P_NODE_110540_length_240_cov_2.035928_g109517_i0 | PRJNA724011 | 110540 | 240 | 2.035928 | 4.8862272 | Brachyspira pilosicoli | 52584 | Bacteria | Bacteria | 43.1 | 0.0257 | NR | WP_219711719.1 | 52584 | g109517 | i0 | 72 | 0.3125 | 25 | 7 | 31.3 | 0 | 6 | 80 | 1 | 25 | WP_219711719.1 BspA family leucine-rich repeat surface protein, partial [Brachyspira pilosicoli] | diamond | 75 | 43.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira pilosicoli | ||
| 32675682 | 32675682 | PRJNA724011_P_NODE_11980_length_898_cov_2.606061_g11099_i0 | PRJNA724011 | 11980 | 898 | 2.606061 | 23.40242778 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 73.6 | 1.18e-10 | NR | MBR4684268.1 | 2053615 | g11099 | i0 | 36.6 | 0.547884187082405 | 164 | 71 | 53.8 | 7 | 164 | 646 | 52 | 185 | MBR4684268.1 polynucleotide adenylyltransferase PcnB [Spirochaetia bacterium] | diamond | 492 | 73.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;