RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA724011", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 15 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 15 ✖

bioproject 1

  • PRJNA724011 · 15 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26703786 26703786 PRJNA724011_P_NODE_80321_length_277_cov_0.931373_g79298_i0 PRJNA724011 80321 277 0.931373 2.57990321 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 47.4 0.001   NR MFH1692346.1 2035772 g79298 i0 30.6 0.92057761732852 85 46 92.1 1 269 15 11 82 MFH1692346.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase [Candidatus Omnitrophota bacterium] diamond 255 47.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26988726 26988726 PRJNA724011_P_NODE_87182_length_263_cov_1.373684_g86159_i0 PRJNA724011 87182 263 1.373684 3.61278892 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 68.2 5.56e-11   NR MCX5678998.1 2035772 g86159 i0 49.3 0.76425855513308 67 33 76.4 1 7 207 7841 7906 MCX5678998.1 peptidoglycan-binding protein [Candidatus Omnitrophota bacterium] diamond 201 68.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28504916 28504916 PRJNA724011_P_NODE_8007_length_1120_cov_2.183381_g7305_i0 PRJNA724011 8007 1120 2.183381 24.4538672 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 55.5 3.65e-4   NR MDE2222692.1 2035772 g7305 i0 29.1 0.377678571428571 141 70 32.9 4 606 974 1227 1355 MDE2222692.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 423 55.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28599754 28599754 PRJNA724011_P_NODE_19747_length_662_cov_1.560272_g18739_i0 PRJNA724011 19747 662 1.560272 10.32900064 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 81.3 1.16e-13   NR MFA5499444.1 2035772 g18739 i0 32.6 1.16465256797583 129 84 58.5 2 398 12 1808 1933 MFA5499444.1 PEP/pyruvate-binding domain-containing protein [Candidatus Omnitrophota bacterium] diamond 771 81.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28631438 28631438 PRJNA724011_P_NODE_55087_length_346_cov_1.597070_g54064_i0 PRJNA724011 55087 346 1.59707 5.5258622 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 80.1 2.15e-16   NR MEE8317874.1 2035772 g54064 i0 45.3 0.823699421965318 95 52 82.4 0 327 43 45 139 MEE8317874.1 ribonuclease HI family protein [Candidatus Omnitrophota bacterium] diamond 285 80.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28947238 28947238 PRJNA724011_P_NODE_76568_length_285_cov_1.344340_g75545_i0 PRJNA724011 76568 285 1.34434 3.831369 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.1 0.0461   NR MBN2483307.1 2035772 g75545 i0 32.8 0.673684210526316 64 35 60 2 196 26 855 917 MBN2483307.1 FG-GAP repeat protein [Candidatus Omnitrophota bacterium] diamond 192 43.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29619968 29619968 PRJNA724011_P_NODE_78250_length_281_cov_1.480769_g77227_i0 PRJNA724011 78250 281 1.480769 4.16096089 Bacteria 2 Bacteria Bacteria 122 6.0599999999999994e-30   NR KPK42528.1 1703776 g77227 i0 53.3 2.94661921708185 92 43 98.2 0 3 278 189 280 KPK42528.1 MAG: hypothetical protein AMJ78_02245 [Omnitrophica WOR_2 bacterium SM23_29] diamond 828 122 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium SM23_29
29641208 29641208 PRJNA724011_P_NODE_45190_length_390_cov_1.189274_g44167_i0 PRJNA724011 45190 390 1.189274 4.6381686 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 82 3.7e-15   NR MDP2929707.1 2035772 g44167 i0 50 1.23846153846154 82 40 62.3 1 2 244 2394 2475 MDP2929707.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 483 82 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30051941 30051941 PRJNA724011_P_NODE_13951_length_821_cov_9.477273_g13022_i0 PRJNA724011 13951 821 9.477273 77.80841133 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 104 5.54e-24   NR MEE8317874.1 2035772 g13022 i0 43.3 0.489646772228989 134 76 49 0 636 235 7 140 MEE8317874.1 ribonuclease HI family protein [Candidatus Omnitrophota bacterium] diamond 402 104 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30336963 30336963 PRJNA724011_P_NODE_79892_length_277_cov_3.642157_g78869_i0 PRJNA724011 79892 277 3.642157 10.08877489 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 95.1 1.05e-20   NR MFH0763971.1 2035772 g78869 i0 58.9 10.3537906137184 73 30 79.1 0 229 11 6 78 MFH0763971.1 molecular chaperone DnaJ [Candidatus Omnitrophota bacterium] diamond 2868 95.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31506116 31506116 PRJNA724011_P_NODE_95496_length_250_cov_0.870056_g94473_i0 PRJNA724011 95496 250 0.870056 2.17514 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.5 6.16e-6   NR MFA5094136.1 2035772 g94473 i0 43.6 2.016 55 31 66 0 248 84 534 588 MFA5094136.1 phosphoenolpyruvate carboxykinase (GTP) [Candidatus Omnitrophota bacterium] diamond 504 53.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31611273 31611273 PRJNA724011_P_NODE_63936_length_317_cov_1.881148_g62913_i0 PRJNA724011 63936 317 1.881148 5.96323916 Pseudomonadati 3379134 Bacteria Bacteria 65.9 1.87e-11   NR MBN1586083.1 2035772 g62913 i0 45.2 9.05678233438486 73 39 68.1 1 42 257 4 76 MBN1586083.1 RNA-binding protein [Candidatus Omnitrophota bacterium] diamond 2871 65.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31821988 31821988 PRJNA724011_P_NODE_27177_length_538_cov_1.180645_g26161_i0 PRJNA724011 27177 538 1.180645 6.3518701 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 87 3.59e-16   NR MCM8812159.1 2035772 g26161 i0 33.9 0.953531598513011 171 73 95.4 4 535 23 2194 2324 MCM8812159.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 513 87 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32550198 32550198 PRJNA724011_P_NODE_66199_length_311_cov_1.268908_g65176_i0 PRJNA724011 66199 311 1.268908 3.94630388 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 57.8 1.7e-7   NR MBI3307112.1 2035772 g65176 i0 29.5 0.916398713826367 95 67 91.6 0 306 22 108 202 MBI3307112.1 START domain-containing protein [Candidatus Omnitrophota bacterium] diamond 285 57.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32906589 32906589 PRJNA724011_P_NODE_8420_length_1088_cov_3.459113_g7700_i0 PRJNA724011 8420 1088 3.459113 37.63514944 Pseudomonadati 3379134 Bacteria Bacteria 91.3 7.28e-19   NR MCM8805026.1 2035772 g7700 i0 58.2 0.446691176470588 79 33 21.8 0 385 149 10 88 MCM8805026.1 30S ribosomal protein S15 [Candidatus Omnitrophota bacterium] diamond 486 91.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;