RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA724011", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA724011 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
710521 710521 PRJNA724011_P_NODE_30361_length_502_cov_0.981352_g29343_i0 PRJNA724011 30361 502 0.981352 4.92638704 Roseithermus sacchariphilus 2893045 Bacteria Bacteria 111 7.98e-20   NTclustered gi|1417721500|gb|CP030158.1| 2893045 g29343 i0 88.889 0.179282868525896 90 10 18 0 15 104 217033 216944 Roseithermus sacchariphilus strain MEBiC09517 chromosome, complete genome blastn 90 111 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salisaetaceae Roseithermus Roseithermus sacchariphilus
5814495 5814495 PRJNA724011_P_NODE_86045_length_265_cov_1.604167_g85022_i0 PRJNA724011 86045 265 1.604167 4.25104255 Roseithermus sacchariphilus 2893045 Bacteria Bacteria 187 6.3599999999999985e-43   NTclustered gi|1417721500|gb|CP030158.1| 2893045 g85022 i0 81.385 61.9018867924528 231 41 87 2 36 265 4388396 4388167 Roseithermus sacchariphilus strain MEBiC09517 chromosome, complete genome blastn 16404 187 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salisaetaceae Roseithermus Roseithermus sacchariphilus
29294184 29294184 PRJNA724011_P_NODE_100709_length_247_cov_0.885057_g99686_i0 PRJNA724011 100709 247 0.885057 2.18609079 Rhodothermales bacterium 2306054 Bacteria Bacteria 43.5 0.0184   NR NNE69657.1 2306054 g99686 i0 37.3 0.716599190283401 59 37 71.7 0 45 221 16 74 NNE69657.1 flagellar motor protein MotA [Rhodothermales bacterium] diamond 177 43.5 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
29651573 29651573 PRJNA724011_P_NODE_52930_length_354_cov_1.637011_g51907_i0 PRJNA724011 52930 354 1.637011 5.79501894 FCB group 1783270 Bacteria Bacteria 112 3.62e-27   NR WP_183991756.1 146919 g51907 i0 49.1 11.7881355932203 116 49 98.3 1 2 349 203 308 WP_183991756.1 GDP-mannose 4,6-dehydratase [Salinibacter ruber] diamond 4173 112 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinibacter Salinibacter ruber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;