RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA724011", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA724011 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28126006 28126006 PRJNA724011_P_NODE_110065_length_241_cov_0.916667_g109042_i0 PRJNA724011 110065 241 0.916667 2.20916747 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 42 0.0433   NR MCF6284793.1 2030809 g109042 i0 55.9 0.423236514522822 34 15 42.3 0 102 1 99 132 MCF6284793.1 ankyrin repeat domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 102 42 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29609640 29609640 PRJNA724011_P_NODE_35550_length_455_cov_1.306283_g34529_i0 PRJNA724011 35550 455 1.306283 5.9435876499999996 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 197 4.59e-59   NR MBW7866211.1 2030809 g34529 i0 58.5 0.969230769230769 147 61 96.9 0 455 15 181 327 MBW7866211.1 alpha-mannosidase [Candidatus Hydrogenedentota bacterium] diamond 441 197 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32801706 32801706 PRJNA724011_P_NODE_21220_length_631_cov_1.707885_g20208_i0 PRJNA724011 21220 631 1.707885 10.77675435 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 47 0.0236   NR HIJ65184.1 2030809 g20208 i0 27.6 0.499207606973059 105 68 49.9 1 542 228 8 104 HIJ65184.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 315 47 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;