RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA722925" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

bioproject 1

  • PRJNA722925 · 1 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31442523 31442523 PRJNA722925_S_NODE_1556_length_341_cov_2.118421_g1493_i0 PRJNA722925 1556 341 2.118421 7.22381561 archaeon 1906665 Archaea Archaea 82.8 1.27e-16   NR MCQ2818700.1 1906665 g1493 i0 48.3 0.782991202346041 89 30 73.9 2 341 90 155 232 MCQ2818700.1 30S ribosomal protein S3 [archaeon] diamond 267 82.8 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;