RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA722925" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA722925 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22871203 22871203 PRJNA722925_S_NODE_3518_length_236_cov_2.095477_g3455_i0 PRJNA722925 3518 236 2.095477 4.94532572 root 1 Root_unresolved Root_unresolved 436 4.999999999999999e-118   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g3455 i0 100 99.9618644067797 236 0 100 0 1 236 3882 3647 Moloney murine leukemia virus, complete genome blastn 23591 436 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
24145219 24145219 PRJNA722925_S_NODE_4219_length_218_cov_1.292818_g4156_i0 PRJNA722925 4219 218 1.292818 2.81834324 root 1 Root_unresolved Root_unresolved 383 6.02e-102   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g4156 i0 100 94.9449541284404 207 0 95 0 12 218 2596 2802 Moloney murine leukemia virus, complete genome blastn 20698 383 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;