RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA721440" and tax_phylum = "Chloroflexota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 15 ✖

tax_kingdom 1

bioproject 1

  • PRJNA721440 · 15 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12189443 12189443 PRJNA721440_S_NODE_13570_length_183_cov_1.261194_g13444_i0 PRJNA721440 13570 183 1.261194 2.30798502 Anaerolineae bacterium 2052143 Bacteria Bacteria 95.1 2.35e-21   NR MDX1520436.1 2052143 g13444 i0 84.8 20.016393442623 46 7 75.4 0 4 141 184 229 MDX1520436.1 insulinase family protein [Anaerolineae bacterium] diamond 3663 95.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
12189457 12189457 PRJNA721440_S_NODE_2010_length_389_cov_3.232353_g1884_i0 PRJNA721440 2010 389 3.232353 12.57385317 Caldilineae bacterium 2420332 Bacteria Bacteria 134 9.8e-34   NR RME54174.1 2420332 g1884 i0 57.4 2.96915167095116 129 55 99.5 0 388 2 146 274 RME54174.1 MAG: sodium-translocating pyrophosphatase, partial [Caldilineae bacterium] diamond 1155 134 1 Bacteria   Bacillati Chloroflexota Caldilineae       Caldilineae bacterium
19837057 19837057 PRJNA721440_S_NODE_10576_length_201_cov_1.026316_g10450_i0 PRJNA721440 10576 201 1.026316 2.06289516 Anaerolineae bacterium 2052143 Bacteria Bacteria 84 3.86e-18   NR HHB90088.1 2052143 g10450 i0 61.5 3.91044776119403 65 24 97 1 197 3 53 116 HHB90088.1 translation elongation factor Ts [Anaerolineae bacterium] diamond 786 84 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
26682549 26682549 PRJNA721440_S_NODE_22261_length_150_cov_8.029703_g22135_i0 PRJNA721440 22261 150 8.029703 12.0445545 root 1 Root_unresolved Root_unresolved 48.1 8.11e-5   NR MDY7040159.1 2026724 g22135 i0 54.8 2.56 42 18 82 1 14 136 128 169 MDY7040159.1 DUF5519 family protein [Chloroflexota bacterium] diamond 384 48.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27431563 27431563 PRJNA721440_S_NODE_15503_length_174_cov_2.200000_g15377_i0 PRJNA721440 15503 174 2.2 3.828 Chloroflexota bacterium 2026724 Bacteria Bacteria 45.4 0.00151   NR MCI0439151.1 2026724 g15377 i0 53.8 0.672413793103448 39 18 67.2 0 47 163 2 40 MCI0439151.1 NUDIX domain-containing protein [Chloroflexota bacterium] diamond 117 45.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28157765 28157765 PRJNA721440_S_NODE_4725_length_272_cov_2.690583_g4599_i0 PRJNA721440 4725 272 2.690583 7.31838576 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 43.1 0.0354   NR MBF8267512.1 2026734 g4599 i0 35.8 0.738970588235294 67 39 69.5 2 57 245 224 290 MBF8267512.1 hypothetical protein [Dehalococcoidia bacterium] diamond 201 43.1 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
29136577 29136577 PRJNA721440_S_NODE_8689_length_215_cov_2.807229_g8563_i0 PRJNA721440 8689 215 2.807229 6.03554235 Anaerolineales bacterium 2073117 Bacteria Bacteria 53.1 5.56e-6   NR HND47414.1 2073117 g8563 i0 35.7 0.976744186046512 70 43 94.9 2 213 10 739 808 HND47414.1 hypothetical protein [Anaerolineales bacterium] diamond 210 53.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29609559 29609559 PRJNA721440_S_NODE_12530_length_188_cov_3.503597_g12404_i0 PRJNA721440 12530 188 3.503597 6.58676236 Anaerolineae bacterium 2052143 Bacteria Bacteria 65.1 1.56e-10   NR MBC7811795.1 2052143 g12404 i0 56.7 2.77659574468085 60 25 95.7 1 182 3 13 71 MBC7811795.1 lysophospholipase [Anaerolineae bacterium] diamond 522 65.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29767645 29767645 PRJNA721440_S_NODE_13071_length_185_cov_3.544118_g12945_i0 PRJNA721440 13071 185 3.544118 6.5566183 Chloroflexota bacterium 2026724 Bacteria Bacteria 61.2 2.85e-9   NR MBM4434004.1 2026724 g12945 i0 67.5 4.39459459459459 40 13 64.9 0 128 9 36 75 MBM4434004.1 putative 4-mercaptohistidine N1-methyltransferase [Chloroflexota bacterium] diamond 813 61.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30778795 30778795 PRJNA721440_S_NODE_11614_length_194_cov_1.731034_g11488_i0 PRJNA721440 11614 194 1.731034 3.35820596 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.3 0.00562   NR PIE81201.1 2026724 g11488 i0 71.4 0.865979381443299 28 8 43.3 0 194 111 230 257 PIE81201.1 MAG: peptidase S9 [Chloroflexota bacterium] diamond 168 44.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31442510 31442510 PRJNA721440_S_NODE_3016_length_327_cov_3.050360_g2890_i0 PRJNA721440 3016 327 3.05036 9.9746772 Anaerolineales bacterium 2073117 Bacteria Bacteria 93.2 1.97e-19   NR HND47414.1 2073117 g2890 i0 47.1 0.935779816513762 102 50 89.9 1 319 26 543 644 HND47414.1 hypothetical protein [Anaerolineales bacterium] diamond 306 93.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32011928 32011928 PRJNA721440_S_NODE_2918_length_331_cov_3.843972_g2792_i0 PRJNA721440 2918 331 3.843972 12.72354732 Anaerolineales bacterium 2073117 Bacteria Bacteria 71.2 1.03e-11   NR HND47413.1 2073117 g2792 i0 36.9 0.933534743202417 103 64 92.4 1 307 2 151 253 HND47413.1 Ty1/Copia family ribonuclease HI [Anaerolineales bacterium] diamond 309 71.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32328674 32328674 PRJNA721440_S_NODE_3419_length_309_cov_1.396154_g3293_i0 PRJNA721440 3419 309 1.396154 4.31411586 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 45.1 0.0126   NR HEX9269468.1 3047546 g3293 i0 33.7 0.980582524271845 101 50 91.3 3 295 14 876 966 HEX9269468.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Limnocylindria bacterium] diamond 303 45.1 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
32423268 32423268 PRJNA721440_S_NODE_9219_length_210_cov_9.739130_g9093_i0 PRJNA721440 9219 210 9.73913 20.452173 Anaerolineales bacterium 2073117 Bacteria Bacteria 68.9 1.39e-11   NR HND47414.1 2073117 g9093 i0 53.6 0.985714285714286 69 32 98.6 0 3 209 652 720 HND47414.1 hypothetical protein [Anaerolineales bacterium] diamond 207 68.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32770169 32770169 PRJNA721440_S_NODE_9160_length_211_cov_1.802469_g9034_i0 PRJNA721440 9160 211 1.802469 3.80320959 Anaerolineales bacterium 2073117 Bacteria Bacteria 46.6 0.0011   NR HND47414.1 2073117 g9034 i0 40.7 0.838862559241706 59 33 82.5 2 208 35 147 204 HND47414.1 hypothetical protein [Anaerolineales bacterium] diamond 177 46.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;