RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA721440" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA721440 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28536639 28536639 PRJNA721440_S_NODE_9827_length_206_cov_2.452229_g9701_i0 PRJNA721440 9827 206 2.452229 5.05159174 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 42 0.0351   NR GIV03551.1 2682145 g9701 i0 43.1 0.742718446601942 51 27 74.3 1 36 188 47 95 GIV03551.1 MAG: hypothetical protein KatS3mg015_2381 [Fimbriimonadales bacterium] diamond 153 42 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;