RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA721440" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 5 ✖

bioproject 1

  • PRJNA721440 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17288169 17288169 PRJNA721440_S_NODE_10494_length_201_cov_3.559211_g10368_i0 PRJNA721440 10494 201 3.559211 7.15401411 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.017   NTclustered gi|323706731|gb|CP002529.1| 985053 g10368 i0 100 0.139303482587065 28 0 14 0 41 68 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
26735097 26735097 PRJNA721440_S_NODE_3161_length_320_cov_1.904059_g3035_i0 PRJNA721440 3161 320 1.904059 6.0929888 Nitrososphaerota archaeon 2026795 Archaea Archaea 44.7 0.0189   NR MBT5201713.1 2026795 g3035 i0 44.4 0.421875 45 24 42.2 1 136 2 316 359 MBT5201713.1 polysaccharide deacetylase family protein [Nitrososphaerota archaeon] diamond 135 44.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
27589309 27589309 PRJNA721440_S_NODE_8484_length_217_cov_2.476190_g8358_i0 PRJNA721440 8484 217 2.47619 5.3733323 Nitrososphaerota archaeon 2026795 Archaea Archaea 50.8 3.56e-5   NR MDE1852183.1 2026795 g8358 i0 49 0.67741935483871 49 25 67.7 0 149 3 93 141 MDE1852183.1 aromatic amino acid lyase [Nitrososphaerota archaeon] diamond 147 50.8 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
30778807 30778807 PRJNA721440_S_NODE_8714_length_215_cov_1.566265_g8588_i0 PRJNA721440 8714 215 1.566265 3.36746975 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 43.9 0.0102   NR HSB57574.1 2202732 g8588 i0 43.6 2.13488372093023 55 31 76.7 0 51 215 401 455 HSB57574.1 polysaccharide deacetylase family protein [Nitrosopumilaceae archaeon] diamond 459 43.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
31695553 31695553 PRJNA721440_S_NODE_4317_length_282_cov_2.163090_g4191_i0 PRJNA721440 4317 282 2.16309 6.0999138 Nitrosopumilus sp. 2024843 Archaea Archaea 57.4 3.57e-7   NR MDA7495390.1 2024843 g4191 i0 35.6 0.957446808510638 90 49 93.6 3 266 3 160 242 MDA7495390.1 hypothetical protein [Nitrosopumilus sp.] diamond 270 57.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;