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contig_metadata

18 rows where bioproject = "PRJNA721440" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 18 ✖

bioproject 1

  • PRJNA721440 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1986174 1986174 PRJNA721440_S_NODE_2202_length_373_cov_3.283951_g2076_i0 PRJNA721440 2202 373 3.283951 12.24913723 Aparavirus sp. 1955142 Viruses Viruses 311 5.3e-80   NTclustered gi|2196304182|gb|MZ679100.1| 1955142 g2076 i0 82.192 3.27345844504021 365 61 97 4 2 364 4518 4880 MAG: Aparavirus sp. isolate s48-k141_542821 hypothetical protein 1 and hypothetical protein 2 genes, complete cds blastn 1221 311 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
8363477 8363477 PRJNA721440_S_NODE_5307_length_259_cov_196.723810_g5181_i0 PRJNA721440 5307 259 196.72381 509.5146679 Betacoronavirus pandemicum 3418604 Viruses Viruses 122 1.7699999999999998e-23   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g5181 i0 95 0.602316602316602 80 1 30 3 183 259 120 41 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 156 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9638626 9638626 PRJNA721440_S_NODE_19308_length_163_cov_1.824561_g19182_i0 PRJNA721440 19308 163 1.824561 2.97403443 Aparavirus sp. 1955142 Viruses Viruses 109 3.15e-26   NR ULF99835.1 1955142 g19182 i0 92.5 0.975460122699387 53 4 97.5 0 161 3 1164 1216 ULF99835.1 MAG: hypothetical protein 1 [Aparavirus sp.] diamond 159 109 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
9638635 9638635 PRJNA721440_S_NODE_5748_length_251_cov_72.539604_g5622_i0 PRJNA721440 5748 251 72.539604 182.07440604 Betacoronavirus pandemicum 3418604 Viruses Viruses 119 2.21e-22   NTclustered gi|2165835426|emb|OV196492.1| 2697049 g5622 i0 94.872 14.9482071713147 78 1 30 2 1 75 61 138 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3752 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12189465 12189465 PRJNA721440_S_NODE_3090_length_323_cov_59.204380_g2964_i0 PRJNA721440 3090 323 59.20438 191.2301474 Betacoronavirus pandemicum 3418604 Viruses Viruses 122 2.2799999999999994e-23   NTclustered gi|2165835005|emb|OV196273.1| 2697049 g2964 i0 96.104 0.439628482972136 77 0 23 2 250 323 112 36 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 142 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13463892 13463892 PRJNA721440_S_NODE_14331_length_179_cov_2.961538_g14205_i0 PRJNA721440 14331 179 2.961538 5.30115302 Ampelovirus tetravitis 3426346 Viruses Viruses 60.2 9.06e-5   NTclustered gi|2452977696|gb|OP752675.1| 70177 g14205 i0 100 0.17877094972067 32 0 18 0 1 32 13853 13822 Grapevine leafroll-associated virus 4 isolate LC9_N5, complete genome blastn 32 60.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Ampelovirus Ampelovirus tetravitis
13463901 13463901 PRJNA721440_S_NODE_1771_length_408_cov_6.448468_g1645_i0 PRJNA721440 1771 408 6.448468 26.30974944 Aparavirus sp. 1955142 Viruses Viruses 212 1.9e-61   NR ULF99836.1 1955142 g1645 i0 72 1.05147058823529 143 32 99.3 1 3 407 475 617 ULF99836.1 MAG: hypothetical protein 2 [Aparavirus sp.] diamond 429 212 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
13463915 13463915 PRJNA721440_S_NODE_2551_length_351_cov_1.033113_g2425_i0 PRJNA721440 2551 351 1.033113 3.62622663 Betacoronavirus pandemicum 3418604 Viruses Viruses 69.4 3.29e-7   NTclustered gi|2557639802|emb|OY695838.1| 2697049 g2425 i0 95.455 0.216524216524217 44 1 12 1 304 346 4713 4756 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 76 69.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18561997 18561997 PRJNA721440_S_NODE_5695_length_252_cov_208.211823_g5569_i0 PRJNA721440 5695 252 208.211823 524.69379396 Betacoronavirus pandemicum 3418604 Viruses Viruses 82.4 2.9099999999999998e-11   NTclustered gi|2046845739|emb|OU076650.1| 2697049 g5569 i0 96.078 0.468253968253968 51 0 19 1 204 252 204 154 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 118 82.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
19837074 19837074 PRJNA721440_S_NODE_14176_length_180_cov_1.793893_g14050_i0 PRJNA721440 14176 180 1.793893 3.2290074 Zebrafish picornavirus 1 2304617 Viruses Viruses 305 1.06e-78   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g14050 i0 97.222 3 180 5 100 0 1 180 5633 5454 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 540 305 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19837105 19837105 PRJNA721440_S_NODE_3716_length_298_cov_256.232932_g3590_i0 PRJNA721440 3716 298 256.232932 763.57413736 Betacoronavirus pandemicum 3418604 Viruses Viruses 121 7.489999999999999e-23   NTclustered gi|2165835426|emb|OV196492.1| 2697049 g3590 i0 94.937 0.76510067114094 79 1 26 2 1 76 176 254 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 228 121 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
27241634 27241634 PRJNA721440_S_NODE_9363_length_209_cov_5.337500_g9237_i0 PRJNA721440 9363 209 5.3375 11.155375 Aparavirus sp. 1955142 Viruses Viruses 122 2.18e-30   NR ULF99836.1 1955142 g9237 i0 82.4 0.976076555023923 68 12 97.6 0 206 3 199 266 ULF99836.1 MAG: hypothetical protein 2 [Aparavirus sp.] diamond 204 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
27652488 27652488 PRJNA721440_S_NODE_3024_length_327_cov_2.118705_g2898_i0 PRJNA721440 3024 327 2.118705 6.9281653499999996 Aparavirus sp. 1955142 Viruses Viruses 167 1.17e-45   NR ULF99826.1 1955142 g2898 i0 76.4 1.95412844036697 106 25 97.2 0 5 322 58 163 ULF99826.1 MAG: hypothetical protein 2 [Aparavirus sp.] diamond 639 167 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
28062698 28062698 PRJNA721440_S_NODE_14105_length_180_cov_4.206107_g13979_i0 PRJNA721440 14105 180 4.206107 7.5709926 Aparavirus sp. 1955142 Viruses Viruses 98.6 3.41e-22   NR ULF99835.1 1955142 g13979 i0 83.1 0.983333333333333 59 9 98.3 1 179 3 600 657 ULF99835.1 MAG: hypothetical protein 1 [Aparavirus sp.] diamond 177 98.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
30241714 30241714 PRJNA721440_S_NODE_4192_length_285_cov_5.245763_g4066_i0 PRJNA721440 4192 285 5.245763 14.95042455 Aparavirus sp. 1955142 Viruses Viruses 147 6.94e-39   NR ULF99836.1 1955142 g4066 i0 77.4 0.978947368421053 93 21 97.9 0 6 284 311 403 ULF99836.1 MAG: hypothetical protein 2 [Aparavirus sp.] diamond 279 147 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
30273528 30273528 PRJNA721440_S_NODE_17172_length_168_cov_3.050420_g17046_i0 PRJNA721440 17172 168 3.05042 5.1247056 African cichlid piscichuvirus 3065075 Viruses Viruses 64.3 3.26e-10   NR WLN26256.1 3065075 g17046 i0 57.7 0.928571428571429 52 22 92.9 0 5 160 260 311 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 156 64.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
31063341 31063341 PRJNA721440_S_NODE_17115_length_168_cov_5.806723_g16989_i0 PRJNA721440 17115 168 5.806723 9.75529464 Aparavirus sp. 1955142 Viruses Viruses 48.9 9.29e-5   NR ULF99836.1 1955142 g16989 i0 90.5 0.375 21 2 37.5 0 1 63 791 811 ULF99836.1 MAG: hypothetical protein 2 [Aparavirus sp.] diamond 63 48.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
32297047 32297047 PRJNA721440_S_NODE_11439_length_195_cov_2.130137_g11313_i0 PRJNA721440 11439 195 2.130137 4.15376715 Aparavirus sp. 1955142 Viruses Viruses 102 2.67e-23   NR ULF99836.1 1955142 g11313 i0 67.7 1 65 21 100 0 1 195 418 482 ULF99836.1 MAG: hypothetical protein 2 [Aparavirus sp.] diamond 195 102 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;