RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA721440", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA721440 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23663173 23663173 PRJNA721440_S_NODE_11139_length_197_cov_1.790541_g11013_i0 PRJNA721440 11139 197 1.790541 3.52736577 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 99 2.16e-16   NTclustered gi|347516615|gb|HQ339915.1| 32597 g11013 i0 79.167 1.57360406091371 144 28 73 2 2 144 478 336 Perkinsus olseni strain ALG1 heat shock protein 90 gene, partial cds blastn 310 99 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30494508 30494508 PRJNA721440_S_NODE_2853_length_334_cov_2.652632_g2727_i0 PRJNA721440 2853 334 2.652632 8.85979088 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 179 4.7199999999999984e-55   NR XP_002778466.1 423536 g2727 i0 78.2 0.988023952095808 110 24 98.8 0 331 2 30 139 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 330 179 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
31284270 31284270 PRJNA721440_S_NODE_16815_length_169_cov_2.233333_g16689_i0 PRJNA721440 16815 169 2.233333 3.77433277 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 46.2 6.07e-4   NR KAF4745563.1 32597 g16689 i0 41.8 1.95266272189349 55 32 97.6 0 1 165 7 61 KAF4745563.1 hypothetical protein FOZ62_002523, partial [Perkinsus olseni] diamond 330 46.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31632219 31632219 PRJNA721440_S_NODE_5956_length_248_cov_1.376884_g5830_i0 PRJNA721440 5956 248 1.376884 3.41467232 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 68.9 1.06e-11   NR TEB19254.1 2494336 g5830 i0 44.9 0.943548387096774 78 38 93.1 3 5 235 190 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 234 68.9 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;