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contig_metadata

14 rows where bioproject = "PRJNA721440", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 14 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 14 ✖

bioproject 1

  • PRJNA721440 · 14 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22871151 22871151 PRJNA721440_S_NODE_458_length_721_cov_3.813988_g370_i0 PRJNA721440 458 721 3.813988 27.49885348 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 286 4.52e-93   NR RYD65414.1 2026800 g370 i0 73.4 0.844660194174757 203 52 84.5 1 609 1 56 256 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 609 286 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
24936674 24936674 PRJNA721440_S_NODE_1160_length_486_cov_2.395881_g1036_i0 PRJNA721440 1160 486 2.395881 11.64398166 root 1 Root_unresolved Root_unresolved 196 9.09e-59   NR WP_184343325.1 48466 g1036 i0 55.8 22.2098765432099 163 65 98.1 2 478 2 161 320 WP_184343325.1 SAM-dependent methyltransferase [Prosthecobacter vanneervenii] diamond 10794 196 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter vanneervenii
27536537 27536537 PRJNA721440_S_NODE_19903_length_162_cov_0.920354_g19777_i0 PRJNA721440 19903 162 0.920354 1.49097348 Bacteria 2 Bacteria Bacteria 61.6 6.39e-11   NR GBL24036.1 2026771 g19777 i0 59.6 7.55555555555556 47 19 87 0 2 142 18 64 GBL24036.1 secretory immunoglobulin A-binding protein EsiB [Opitutia bacterium] diamond 1224 61.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
27852110 27852110 PRJNA721440_S_NODE_12584_length_188_cov_1.395683_g12458_i0 PRJNA721440 12584 188 1.395683 2.62388404 root 1 Root_unresolved Root_unresolved 104 1.43e-24   NR WP_185690965.1 388746 g12458 i0 78.7 9.63829787234043 61 13 97.3 0 184 2 133 193 WP_185690965.1 diaminopimelate decarboxylase [Puniceicoccus vermicola] diamond 1812 104 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Puniceicoccaceae Puniceicoccus Puniceicoccus vermicola
28978566 28978566 PRJNA721440_S_NODE_12908_length_186_cov_2.875912_g12782_i0 PRJNA721440 12908 186 2.875912 5.34919632 Prosthecobacter sp. 1965333 Bacteria Bacteria 45.1 0.00268   NR MDP1591546.1 1965333 g12782 i0 62.9 0.564516129032258 35 13 56.5 0 105 1 10 44 MDP1591546.1 UTP--glucose-1-phosphate uridylyltransferase [Prosthecobacter sp.] diamond 105 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
29483387 29483387 PRJNA721440_S_NODE_17430_length_168_cov_0.873950_g17304_i0 PRJNA721440 17430 168 0.87395 1.468236 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 79.7 1.21e-15   NR RYD77031.1 2026800 g17304 i0 69.8 0.946428571428571 53 16 94.6 0 9 167 14 66 RYD77031.1 MAG: hypothetical protein EOP84_16100, partial [Verrucomicrobiaceae bacterium] diamond 159 79.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
29672730 29672730 PRJNA721440_S_NODE_19930_length_162_cov_0.920354_g19804_i0 PRJNA721440 19930 162 0.920354 1.49097348 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 41.6 0.0305   NR MCU0752501.1 2562705 g19804 i0 38.8 0.907407407407407 49 28 90.7 1 10 156 123 169 MCU0752501.1 tetratricopeptide repeat protein [Akkermansiaceae bacterium] diamond 147 41.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
30241709 30241709 PRJNA721440_S_NODE_21952_length_152_cov_4.067961_g21826_i0 PRJNA721440 21952 152 4.067961 6.18330072 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 63.9 2.47e-10   NR RYD69104.1 2026800 g21826 i0 65.3 0.967105263157895 49 16 96.7 1 4 150 26 73 RYD69104.1 MAG: MFS transporter, partial [Verrucomicrobiaceae bacterium] diamond 147 63.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30305283 30305283 PRJNA721440_S_NODE_12312_length_189_cov_5.571429_g12186_i0 PRJNA721440 12312 189 5.571429 10.53000081 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 67.4 1.22e-12   NR RYD73501.1 2026800 g12186 i0 78.6 0.666666666666667 42 9 66.7 0 128 3 3 44 RYD73501.1 MAG: fructose-bisphosphate aldolase class I [Verrucomicrobiaceae bacterium] diamond 126 67.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30842037 30842037 PRJNA721440_S_NODE_134_length_1122_cov_13.505126_g98_i0 PRJNA721440 134 1122 13.505126 151.52751372 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 249 6.33e-76   NR RYD71398.1 2026800 g98 i0 45.7 0.802139037433155 300 150 78.6 6 9 890 69 361 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 900 249 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31000007 31000007 PRJNA721440_S_NODE_19874_length_162_cov_0.920354_g19748_i0 PRJNA721440 19874 162 0.920354 1.49097348 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 47 3.9e-4   NR RYD20361.1 2026800 g19748 i0 45.3 0.981481481481482 53 26 92.6 1 157 8 213 265 RYD20361.1 MAG: phosphatidylinositol-specific phospholipase C domain-containing protein [Verrucomicrobiaceae bacterium] diamond 159 47 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31315989 31315989 PRJNA721440_S_NODE_16295_length_171_cov_2.081967_g16169_i0 PRJNA721440 16295 171 2.081967 3.56016357 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 99 5.089999999999999e-23   NR RYD81270.1 2026800 g16169 i0 83.9 0.982456140350877 56 9 98.2 0 169 2 56 111 RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium] diamond 168 99 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31474264 31474264 PRJNA721440_S_NODE_14356_length_179_cov_2.238462_g14230_i0 PRJNA721440 14356 179 2.238462 4.00684698 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 74.7 8.15e-14   NR RYD76251.1 2026800 g14230 i0 57.6 0.988826815642458 59 25 98.9 0 178 2 162 220 RYD76251.1 MAG: hypothetical protein EOP84_17160, partial [Verrucomicrobiaceae bacterium] diamond 177 74.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
32075196 32075196 PRJNA721440_S_NODE_17798_length_167_cov_0.881356_g17672_i0 PRJNA721440 17798 167 0.881356 1.47186452 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 100 3.9599999999999997e-23   NR HEX2748675.1 2026801 g17672 i0 83.3 1.94011976047904 54 9 97 0 166 5 250 303 HEX2748675.1 UTP--glucose-1-phosphate uridylyltransferase [Verrucomicrobiales bacterium] diamond 324 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;