contig_metadata
25 rows where bioproject = "PRJNA721440" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14739172 | 14739172 | PRJNA721440_S_NODE_17552_length_167_cov_3.525424_g17426_i0 | PRJNA721440 | 17552 | 167 | 3.525424 | 5.88745808 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 226 | 7.799999999999999e-55 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g17426 | i0 | 92.405 | 177.005988023952 | 158 | 12 | 95 | 0 | 10 | 167 | 175619 | 175462 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 29560 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 22871151 | 22871151 | PRJNA721440_S_NODE_458_length_721_cov_3.813988_g370_i0 | PRJNA721440 | 458 | 721 | 3.813988 | 27.49885348 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 286 | 4.52e-93 | NR | RYD65414.1 | 2026800 | g370 | i0 | 73.4 | 0.844660194174757 | 203 | 52 | 84.5 | 1 | 609 | 1 | 56 | 256 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 609 | 286 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 24936674 | 24936674 | PRJNA721440_S_NODE_1160_length_486_cov_2.395881_g1036_i0 | PRJNA721440 | 1160 | 486 | 2.395881 | 11.64398166 | root | 1 | Root_unresolved | Root_unresolved | 196 | 9.09e-59 | NR | WP_184343325.1 | 48466 | g1036 | i0 | 55.8 | 22.2098765432099 | 163 | 65 | 98.1 | 2 | 478 | 2 | 161 | 320 | WP_184343325.1 SAM-dependent methyltransferase [Prosthecobacter vanneervenii] | diamond | 10794 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 27536537 | 27536537 | PRJNA721440_S_NODE_19903_length_162_cov_0.920354_g19777_i0 | PRJNA721440 | 19903 | 162 | 0.920354 | 1.49097348 | Bacteria | 2 | Bacteria | Bacteria | 61.6 | 6.39e-11 | NR | GBL24036.1 | 2026771 | g19777 | i0 | 59.6 | 7.55555555555556 | 47 | 19 | 87 | 0 | 2 | 142 | 18 | 64 | GBL24036.1 secretory immunoglobulin A-binding protein EsiB [Opitutia bacterium] | diamond | 1224 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 27652483 | 27652483 | PRJNA721440_S_NODE_14424_length_179_cov_1.353846_g14298_i0 | PRJNA721440 | 14424 | 179 | 1.353846 | 2.42338434 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 94.7 | 6.040000000000001e-21 | NR | NOZ40414.1 | 2026780 | g14298 | i0 | 74.6 | 2.91620111731844 | 59 | 15 | 98.9 | 0 | 2 | 178 | 343 | 401 | NOZ40414.1 3-isopropylmalate dehydratase large subunit [Planctomycetota bacterium] | diamond | 522 | 94.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27715860 | 27715860 | PRJNA721440_S_NODE_19104_length_164_cov_0.860870_g18978_i0 | PRJNA721440 | 19104 | 164 | 0.86087 | 1.4118268 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.1 | 0.00941 | NR | NRA36897.1 | 2026780 | g18978 | i0 | 44.7 | 0.859756097560976 | 47 | 25 | 86 | 1 | 14 | 154 | 29 | 74 | NRA36897.1 GHKL domain-containing protein [Planctomycetota bacterium] | diamond | 141 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27852110 | 27852110 | PRJNA721440_S_NODE_12584_length_188_cov_1.395683_g12458_i0 | PRJNA721440 | 12584 | 188 | 1.395683 | 2.62388404 | root | 1 | Root_unresolved | Root_unresolved | 104 | 1.43e-24 | NR | WP_185690965.1 | 388746 | g12458 | i0 | 78.7 | 9.63829787234043 | 61 | 13 | 97.3 | 0 | 184 | 2 | 133 | 193 | WP_185690965.1 diaminopimelate decarboxylase [Puniceicoccus vermicola] | diamond | 1812 | 104 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Puniceicoccaceae | Puniceicoccus | Puniceicoccus vermicola | |
| 28978562 | 28978562 | PRJNA721440_S_NODE_1008_length_518_cov_29.699360_g885_i0 | PRJNA721440 | 1008 | 518 | 29.69936 | 153.8426848 | Candidatus Subterrananammoxibius californiae | 3063417 | Bacteria | Bacteria | 216 | 1.41e-61 | NR | MDO8094970.1 | 3063417 | g885 | i0 | 62 | 0.99034749034749 | 171 | 63 | 99 | 2 | 5 | 517 | 603 | 771 | MDO8094970.1 RNase H-like domain-containing protein [Candidatus Subterrananammoxibius californiae] | diamond | 513 | 216 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Subterrananammoxibiaceae | Candidatus Subterrananammoxibius | Candidatus Subterrananammoxibius californiae | |
| 28978566 | 28978566 | PRJNA721440_S_NODE_12908_length_186_cov_2.875912_g12782_i0 | PRJNA721440 | 12908 | 186 | 2.875912 | 5.34919632 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 45.1 | 0.00268 | NR | MDP1591546.1 | 1965333 | g12782 | i0 | 62.9 | 0.564516129032258 | 35 | 13 | 56.5 | 0 | 105 | 1 | 10 | 44 | MDP1591546.1 UTP--glucose-1-phosphate uridylyltransferase [Prosthecobacter sp.] | diamond | 105 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 29483387 | 29483387 | PRJNA721440_S_NODE_17430_length_168_cov_0.873950_g17304_i0 | PRJNA721440 | 17430 | 168 | 0.87395 | 1.468236 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 79.7 | 1.21e-15 | NR | RYD77031.1 | 2026800 | g17304 | i0 | 69.8 | 0.946428571428571 | 53 | 16 | 94.6 | 0 | 9 | 167 | 14 | 66 | RYD77031.1 MAG: hypothetical protein EOP84_16100, partial [Verrucomicrobiaceae bacterium] | diamond | 159 | 79.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 29546600 | 29546600 | PRJNA721440_S_NODE_17250_length_168_cov_1.697479_g17124_i0 | PRJNA721440 | 17250 | 168 | 1.697479 | 2.85176472 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 76.3 | 2.01e-14 | NR | HEX8200246.1 | 2691532 | g17124 | i0 | 61.1 | 1.94642857142857 | 54 | 21 | 96.4 | 0 | 3 | 164 | 9 | 62 | HEX8200246.1 glucose-6-phosphate isomerase [Isosphaeraceae bacterium] | diamond | 327 | 76.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 29672730 | 29672730 | PRJNA721440_S_NODE_19930_length_162_cov_0.920354_g19804_i0 | PRJNA721440 | 19930 | 162 | 0.920354 | 1.49097348 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 41.6 | 0.0305 | NR | MCU0752501.1 | 2562705 | g19804 | i0 | 38.8 | 0.907407407407407 | 49 | 28 | 90.7 | 1 | 10 | 156 | 123 | 169 | MCU0752501.1 tetratricopeptide repeat protein [Akkermansiaceae bacterium] | diamond | 147 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 30241709 | 30241709 | PRJNA721440_S_NODE_21952_length_152_cov_4.067961_g21826_i0 | PRJNA721440 | 21952 | 152 | 4.067961 | 6.18330072 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 63.9 | 2.47e-10 | NR | RYD69104.1 | 2026800 | g21826 | i0 | 65.3 | 0.967105263157895 | 49 | 16 | 96.7 | 1 | 4 | 150 | 26 | 73 | RYD69104.1 MAG: MFS transporter, partial [Verrucomicrobiaceae bacterium] | diamond | 147 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30305283 | 30305283 | PRJNA721440_S_NODE_12312_length_189_cov_5.571429_g12186_i0 | PRJNA721440 | 12312 | 189 | 5.571429 | 10.53000081 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 67.4 | 1.22e-12 | NR | RYD73501.1 | 2026800 | g12186 | i0 | 78.6 | 0.666666666666667 | 42 | 9 | 66.7 | 0 | 128 | 3 | 3 | 44 | RYD73501.1 MAG: fructose-bisphosphate aldolase class I [Verrucomicrobiaceae bacterium] | diamond | 126 | 67.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30842037 | 30842037 | PRJNA721440_S_NODE_134_length_1122_cov_13.505126_g98_i0 | PRJNA721440 | 134 | 1122 | 13.505126 | 151.52751372 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 249 | 6.33e-76 | NR | RYD71398.1 | 2026800 | g98 | i0 | 45.7 | 0.802139037433155 | 300 | 150 | 78.6 | 6 | 9 | 890 | 69 | 361 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 900 | 249 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30873538 | 30873538 | PRJNA721440_S_NODE_13694_length_182_cov_3.015038_g13568_i0 | PRJNA721440 | 13694 | 182 | 3.015038 | 5.48736916 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 41.6 | 0.0426 | NR | MFN7020982.1 | 2052180 | g13568 | i0 | 39.6 | 0.791208791208791 | 48 | 29 | 79.1 | 0 | 14 | 157 | 236 | 283 | MFN7020982.1 GC-type dockerin domain-anchored protein [Phycisphaerales bacterium] | diamond | 144 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 31000007 | 31000007 | PRJNA721440_S_NODE_19874_length_162_cov_0.920354_g19748_i0 | PRJNA721440 | 19874 | 162 | 0.920354 | 1.49097348 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 47 | 3.9e-4 | NR | RYD20361.1 | 2026800 | g19748 | i0 | 45.3 | 0.981481481481482 | 53 | 26 | 92.6 | 1 | 157 | 8 | 213 | 265 | RYD20361.1 MAG: phosphatidylinositol-specific phospholipase C domain-containing protein [Verrucomicrobiaceae bacterium] | diamond | 159 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 31315989 | 31315989 | PRJNA721440_S_NODE_16295_length_171_cov_2.081967_g16169_i0 | PRJNA721440 | 16295 | 171 | 2.081967 | 3.56016357 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 99 | 5.089999999999999e-23 | NR | RYD81270.1 | 2026800 | g16169 | i0 | 83.9 | 0.982456140350877 | 56 | 9 | 98.2 | 0 | 169 | 2 | 56 | 111 | RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium] | diamond | 168 | 99 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 31347733 | 31347733 | PRJNA721440_S_NODE_11256_length_196_cov_3.476190_g11130_i0 | PRJNA721440 | 11256 | 196 | 3.47619 | 6.8133324 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 47.4 | 4.52e-4 | NR | MCA8973576.1 | 2026780 | g11130 | i0 | 44.8 | 0.887755102040816 | 58 | 32 | 88.8 | 0 | 194 | 21 | 30 | 87 | MCA8973576.1 carbamoyl-phosphate synthase large subunit [Planctomycetota bacterium] | diamond | 174 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31474264 | 31474264 | PRJNA721440_S_NODE_14356_length_179_cov_2.238462_g14230_i0 | PRJNA721440 | 14356 | 179 | 2.238462 | 4.00684698 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 74.7 | 8.15e-14 | NR | RYD76251.1 | 2026800 | g14230 | i0 | 57.6 | 0.988826815642458 | 59 | 25 | 98.9 | 0 | 178 | 2 | 162 | 220 | RYD76251.1 MAG: hypothetical protein EOP84_17160, partial [Verrucomicrobiaceae bacterium] | diamond | 177 | 74.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 31548091 | 31548091 | PRJNA721440_S_NODE_9816_length_206_cov_3.133758_g9690_i0 | PRJNA721440 | 9816 | 206 | 3.133758 | 6.45554148 | Bacteria | 2 | Bacteria | Bacteria | 90.5 | 3.66e-20 | NR | MCE2925133.1 | 2026777 | g9690 | i0 | 56.9 | 3.78640776699029 | 65 | 28 | 94.7 | 0 | 10 | 204 | 20 | 84 | MCE2925133.1 queuosine precursor transporter [Phycisphaeraceae bacterium] | diamond | 780 | 90.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 31663784 | 31663784 | PRJNA721440_S_NODE_12417_length_189_cov_1.442857_g12291_i0 | PRJNA721440 | 12417 | 189 | 1.442857 | 2.72699973 | Thermoguttaceae bacterium | 2691551 | Bacteria | Bacteria | 43.1 | 0.0129 | NR | HYW79930.1 | 2691551 | g12291 | i0 | 75 | 0.380952380952381 | 24 | 6 | 38.1 | 0 | 74 | 3 | 42 | 65 | HYW79930.1 ammonium transporter [Thermoguttaceae bacterium] | diamond | 72 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Thermoguttaceae | Thermoguttaceae bacterium | ||
| 32075196 | 32075196 | PRJNA721440_S_NODE_17798_length_167_cov_0.881356_g17672_i0 | PRJNA721440 | 17798 | 167 | 0.881356 | 1.47186452 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 100 | 3.9599999999999997e-23 | NR | HEX2748675.1 | 2026801 | g17672 | i0 | 83.3 | 1.94011976047904 | 54 | 9 | 97 | 0 | 166 | 5 | 250 | 303 | HEX2748675.1 UTP--glucose-1-phosphate uridylyltransferase [Verrucomicrobiales bacterium] | diamond | 324 | 100 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32738962 | 32738962 | PRJNA721440_S_NODE_17040_length_169_cov_0.866667_g16914_i0 | PRJNA721440 | 17040 | 169 | 0.866667 | 1.46466723 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 42.7 | 0.0141 | NR | UCG46482.1 | 2052180 | g16914 | i0 | 45.1 | 0.905325443786982 | 51 | 23 | 90.5 | 2 | 157 | 5 | 99 | 144 | UCG46482.1 MAG: hypothetical protein JSU94_13365, partial [Phycisphaerales bacterium] | diamond | 153 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 32906543 | 32906543 | PRJNA721440_S_NODE_18180_length_166_cov_0.888889_g18054_i0 | PRJNA721440 | 18180 | 166 | 0.888889 | 1.47555574 | root | 1 | Root_unresolved | Root_unresolved | 53.5 | 1.98e-6 | NR | MFM2092802.1 | 2026780 | g18054 | i0 | 54.5 | 4.96987951807229 | 55 | 17 | 99.4 | 1 | 1 | 165 | 96 | 142 | MFM2092802.1 NAD-dependent malic enzyme [Planctomycetota bacterium] | diamond | 825 | 53.9 | 0.992578849721707 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;