RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA721440", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA721440 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18561963 18561963 PRJNA721440_S_NODE_13915_length_181_cov_2.409091_g13789_i0 PRJNA721440 13915 181 2.409091 4.36045471 Pseudomonadati 3379134 Bacteria Bacteria 84.3 5.61e-18   NR KMQ52988.1 1008392 g13789 i0 69 12.6795580110497 58 18 96.1 0 178 5 58 115 KMQ52988.1 Triosephosphate isomerase [Chitinispirillum alkaliphilum] diamond 2295 84.7 0.995277449822904 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae Chitinispirillum Chitinispirillum alkaliphilum
30747225 30747225 PRJNA721440_S_NODE_7394_length_229_cov_1.155556_g7268_i0 PRJNA721440 7394 229 1.155556 2.64622324 Fibrobacterales bacterium 2478481 Bacteria Bacteria 97.4 1.62e-22   NR MBO7130801.1 2478481 g7268 i0 71 0.812227074235808 62 18 81.2 0 205 20 188 249 MBO7130801.1 dihydrodipicolinate reductase [Fibrobacterales bacterium] diamond 186 97.4 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales     Fibrobacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;