RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA721440", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA721440 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29894244 29894244 PRJNA721440_S_NODE_17011_length_169_cov_0.866667_g16885_i0 PRJNA721440 17011 169 0.866667 1.46466723 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 77.8 6.07e-15   NR MBF0407784.1 2053586 g16885 i0 60.7 1.98816568047337 56 22 99.4 0 169 2 278 333 MBF0407784.1 NADP-dependent isocitrate dehydrogenase [Candidatus Rifleibacteriota bacterium] diamond 336 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;