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contig_metadata

16 rows where bioproject = "PRJNA721440" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA721440 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7088951 7088951 PRJNA721440_S_NODE_7826_length_224_cov_1.325714_g7700_i0 PRJNA721440 7826 224 1.325714 2.96959936 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.02   NTclustered gi|66803273|ref|XM_630388.1| 352472 g7700 i0 100 0.125 28 0 13 0 135 162 311 284 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0290947) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
13463904 13463904 PRJNA721440_S_NODE_18771_length_164_cov_4.704348_g18645_i0 PRJNA721440 18771 164 4.704348 7.71513072 Polysphondylium violaceum 133409 Evosea other_Eukaryota 99 5.74e-24   NR KAF2072778.1 133409 g18645 i0 89.6 4.57317073170732 48 5 87.8 0 157 14 176 223 KAF2072778.1 hypothetical protein CYY_005900 [Polysphondylium violaceum] diamond 750 99 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
19837086 19837086 PRJNA721440_S_NODE_18556_length_165_cov_1.258621_g18430_i0 PRJNA721440 18556 165 1.258621 2.07672465 Cavenderia fasciculata 261658 Evosea other_Eukaryota 182 1.6899999999999996e-41   NTclustered gi|470240647|ref|XM_004354263.1| 261658 g18430 i0 88.158 252.890909090909 152 18 92 0 11 162 970 1121 Cavenderia fasciculata ubiquitin (ubqA), partial mRNA blastn 41727 182 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
26988566 26988566 PRJNA721440_S_NODE_15022_length_176_cov_2.291339_g14896_i0 PRJNA721440 15022 176 2.291339 4.03275664 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 44.3 0.00433   NR XP_004338987.1 1257118 g14896 i0 47.4 6.83522727272727 57 22 97.2 2 176 6 208 256 XP_004338987.1 uncharacterized protein ACA1_128810 [Acanthamoeba castellanii str. Neff] diamond 1203 44.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28567893 28567893 PRJNA721440_S_NODE_18567_length_165_cov_1.198276_g18441_i0 PRJNA721440 18567 165 1.198276 1.9771554 Cavenderia fasciculata 261658 Evosea other_Eukaryota 49.3 6.17e-5   NR XP_004351032.1 261658 g18441 i0 49 0.927272727272727 51 26 92.7 0 155 3 370 420 XP_004351032.1 uncharacterized protein DFA_12093 [Cavenderia fasciculata] diamond 153 49.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28788809 28788809 PRJNA721440_S_NODE_7567_length_227_cov_1.185393_g7441_i0 PRJNA721440 7567 227 1.185393 2.69084211 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 70.1 1.63e-12   NR PRP81583.1 1890364 g7441 i0 45.6 1.70484581497797 68 37 89.9 0 3 206 35 102 PRP81583.1 TP53-regulating kinase-like [Planoprotostelium fungivorum] diamond 387 70.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29104883 29104883 PRJNA721440_S_NODE_18008_length_166_cov_2.128205_g17882_i0 PRJNA721440 18008 166 2.128205 3.5328203 Polysphondylium violaceum 133409 Evosea other_Eukaryota 50.4 2.41e-5   NR KAF2077067.1 133409 g17882 i0 41.2 0.921686746987952 51 30 92.2 0 153 1 171 221 KAF2077067.1 hypothetical protein CYY_001634 [Polysphondylium violaceum] diamond 153 50.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29168082 29168082 PRJNA721440_S_NODE_1849_length_401_cov_9.133523_g1723_i0 PRJNA721440 1849 401 9.133523 36.62542723 Polysphondylium violaceum 133409 Evosea other_Eukaryota 160 6.74e-44   NR KAF2069457.1 133409 g1723 i0 63.2 1.01745635910224 136 47 99.5 2 3 401 163 298 KAF2069457.1 hypothetical protein CYY_009221 [Polysphondylium violaceum] diamond 408 160 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29262385 29262385 PRJNA721440_S_NODE_9849_length_206_cov_1.713376_g9723_i0 PRJNA721440 9849 206 1.713376 3.52955456 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 52 1.25e-5   NR PRP86479.1 1890364 g9723 i0 44.1 0.859223300970874 59 32 84.5 1 1 174 431 489 PRP86479.1 hypothetical protein PROFUN_05261 [Planoprotostelium fungivorum] diamond 177 52 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29862498 29862498 PRJNA721440_S_NODE_19811_length_162_cov_1.292035_g19685_i0 PRJNA721440 19811 162 1.292035 2.0930967 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.8 6.34e-17   NR XP_004352082.1 1257118 g19685 i0 75 3.87037037037037 52 13 96.3 0 161 6 165 216 XP_004352082.1 Centractin, putative [Acanthamoeba castellanii str. Neff] diamond 627 82.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29873028 29873028 PRJNA721440_S_NODE_2571_length_350_cov_1.504983_g2445_i0 PRJNA721440 2571 350 1.504983 5.2674405 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 114 7.55e-27   NR XP_003287590.1 5786 g2445 i0 46.6 6.98571428571429 116 62 99.4 0 348 1 306 421 XP_003287590.1 uncharacterized protein DICPUDRAFT_47441 [Dictyostelium purpureum] diamond 2445 114 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
31220827 31220827 PRJNA721440_S_NODE_7315_length_230_cov_0.994475_g7189_i0 PRJNA721440 7315 230 0.994475 2.2872925 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 71.6 2.04e-12   NR XP_646175.1 352472 g7189 i0 48.5 1.85217391304348 68 27 88.7 1 205 2 168 227 XP_646175.1 hypothetical protein DDB_G0269676 [Dictyostelium discoideum AX4] diamond 426 71.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31252733 31252733 PRJNA721440_S_NODE_12355_length_189_cov_2.700000_g12229_i0 PRJNA721440 12355 189 2.7 5.103 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 101 1.5699999999999994e-23   NR XP_004358271.1 1257118 g12229 i0 79.3 2.79365079365079 58 12 92.1 0 176 3 326 383 XP_004358271.1 fumarylacetoacetase [Acanthamoeba castellanii str. Neff] diamond 528 101 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31980178 31980178 PRJNA721440_S_NODE_19278_length_163_cov_2.131579_g19152_i0 PRJNA721440 19278 163 2.131579 3.47447377 Polysphondylium violaceum 133409 Evosea other_Eukaryota 59.7 8.14e-10   NR KAF2073663.1 133409 g19152 i0 65.9 0.754601226993865 41 14 75.5 0 2 124 58 98 KAF2073663.1 hypothetical protein CYY_005013 [Polysphondylium violaceum] diamond 123 59.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32297055 32297055 PRJNA721440_S_NODE_2799_length_337_cov_1.211806_g2673_i0 PRJNA721440 2799 337 1.211806 4.08378622 Polysphondylium violaceum 133409 Evosea other_Eukaryota 114 2.43e-27   NR KAF2073909.1 133409 g2673 i0 60.5 0.765578635014837 86 34 76.6 0 335 78 349 434 KAF2073909.1 hypothetical protein CYY_004797 [Polysphondylium violaceum] diamond 258 114 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32717775 32717775 PRJNA721440_S_NODE_10240_length_203_cov_1.902597_g10114_i0 PRJNA721440 10240 203 1.902597 3.86227191 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 59.3 3.15e-8   NR KAH3732418.1 1580589 g10114 i0 42.6 1.83251231527094 68 35 94.6 1 196 5 808 875 KAH3732418.1 E3 ubiquitin-protein ligase [Pelomyxa schiedti] diamond 372 59.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;