RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA720429", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA720429 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30347431 30347431 PRJNA720429_P_NODE_1892_length_308_cov_1.880851_g1835_i0 PRJNA720429 1892 308 1.880851 5.79302108 Nitzschia 2857 SAR_Eukaryotes SAR_Eukaryotes 85.5 8.58e-19   NR KAG7373989.1 303405 g1835 i0 59.2 2.91233766233766 76 27 70.1 1 294 79 52 127 KAG7373989.1 50S ribosomal protein L14e [Nitzschia inconspicua] diamond 897 85.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
31695544 31695544 PRJNA720429_P_NODE_3577_length_249_cov_0.875000_g3520_i0 PRJNA720429 3577 249 0.875 2.17875 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 70.1 1.24e-12   NR KAI2504009.1 210448 g3520 i0 51.2 3.10843373493976 86 28 86.7 2 2 217 99 184 KAI2504009.1 ribosomal eL6-like protein [Fragilaria crotonensis] diamond 774 70.1 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;