RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA720429" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA720429 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27978475 27978475 PRJNA720429_P_NODE_2785_length_265_cov_1.484375_g2728_i0 PRJNA720429 2785 265 1.484375 3.93359375 Bacteria 2 Bacteria Bacteria 100 8.69e-25   NR OJU87572.1 1895829 g2728 i0 58 1.99245283018868 88 37 99.6 0 265 2 43 130 OJU87572.1 MAG: hypothetical protein BGO17_01080 [Candidatus Saccharibacteria bacterium 49-20] diamond 528 100 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
30368456 30368456 PRJNA720429_P_NODE_4632_length_243_cov_1.729412_g4575_i0 PRJNA720429 4632 243 1.729412 4.20247116 Candidatus Harrisonbacteria bacterium 2528272 Bacteria Bacteria 47 2.57e-4   NR MBI4991629.1 2528272 g4575 i0 60.7 0.345679012345679 28 11 34.6 0 2 85 85 112 MBI4991629.1 hypothetical protein [Candidatus Harrisonbacteria bacterium] diamond 84 47 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;