RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA719595", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA719595 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27873293 27873293 PRJNA719595_P_NODE_6485_length_253_cov_0.866667_g6450_i0 PRJNA719595 6485 253 0.866667 2.19266751 Thermoproteota archaeon 2056631 Archaea Archaea 43.9 0.0168   NR RLG52514.1 2056631 g6450 i0 33.3 0.782608695652174 66 44 78.3 0 244 47 376 441 RLG52514.1 MAG: disulfide reductase [Thermoproteota archaeon] diamond 198 43.9 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
28662786 28662786 PRJNA719595_P_NODE_8867_length_244_cov_0.912281_g8832_i0 PRJNA719595 8867 244 0.912281 2.22596564 Thermoproteota archaeon 2056631 Archaea Archaea 83.6 1.13e-16   NR MDP8886176.1 2056631 g8832 i0 91.8 0.602459016393443 49 4 60.2 0 147 1 1 49 MDP8886176.1 cobalt-precorrin-5B (C(1))-methyltransferase [Thermoproteota archaeon] diamond 147 83.6 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;