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contig_metadata

24 rows where bioproject = "PRJNA719595" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA719595 · 24 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3260810 3260810 PRJNA719595_P_NODE_9183_length_243_cov_0.917647_g9148_i0 PRJNA719595 9183 243 0.917647 2.22988221 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 164 1.0099999999999999e-46   NR HEY9420521.1 2651171 g9148 i0 96.3 2.95061728395062 80 3 98.8 0 241 2 203 282 HEY9420521.1 molybdopterin cofactor-binding domain-containing protein [Thermoanaerobaculia bacterium] diamond 717 164 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
4537846 4537846 PRJNA719595_P_NODE_6524_length_253_cov_0.866667_g6489_i0 PRJNA719595 6524 253 0.866667 2.19266751 Bacteria 2 Bacteria Bacteria 171 2.0599999999999995e-47   NR MCC7243071.1 1978231 g6489 i0 90.4 21.7944664031621 83 8 98.4 0 5 253 17 99 MCC7243071.1 leucine--tRNA ligase [Acidobacteriota bacterium] diamond 5514 172 0.994186046511628 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
4537874 4537874 PRJNA719595_P_NODE_7804_length_248_cov_0.891429_g7769_i0 PRJNA719595 7804 248 0.891429 2.21074392 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 149 3.51e-42   NR HZH92031.1 2283092 g7769 i0 90.2 0.991935483870968 82 8 99.2 0 1 246 55 136 HZH92031.1 ABC transporter permease [Pyrinomonadaceae bacterium] diamond 246 149 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
24144929 24144929 PRJNA719595_P_NODE_4679_length_294_cov_1.022624_g4644_i0 PRJNA719595 4679 294 1.022624 3.00651456 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 117 5.729999999999999e-28   NR HSK79934.1 2651171 g4644 i0 57.1 9.01020408163265 98 42 100 0 294 1 927 1024 HSK79934.1 amino acid adenylation domain-containing protein [Thermoanaerobaculia bacterium] diamond 2649 117 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
26904402 26904402 PRJNA719595_P_NODE_6861_length_252_cov_0.871508_g6826_i0 PRJNA719595 6861 252 0.871508 2.19620016 Pseudomonadati 3379134 Bacteria Bacteria 144 3.82e-39   NR MDX2154290.1 2212468 g6826 i0 81.7 3.9047619047619 82 15 97.6 0 250 5 285 366 MDX2154290.1 glycosyltransferase [Bryobacteraceae bacterium] diamond 984 145 0.993103448275862 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
27399850 27399850 PRJNA719595_P_NODE_8623_length_245_cov_0.906977_g8588_i0 PRJNA719595 8623 245 0.906977 2.22209365 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 42.7 0.0352   NR HEX4310408.1 2052142 g8588 i0 41.4 0.857142857142857 70 34 84.5 2 219 13 138 201 HEX4310408.1 ABC transporter permease [Acidobacteriaceae bacterium] diamond 210 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
27442038 27442038 PRJNA719595_P_NODE_7123_length_251_cov_0.876404_g7088_i0 PRJNA719595 7123 251 0.876404 2.19977404 Bacteria 2 Bacteria Bacteria 150 6.659999999999999e-40   NR MCA1623910.1 1978231 g7088 i0 92.8 1.9840637450199201 83 6 99.2 0 1 249 646 728 MCA1623910.1 hypothetical protein [Acidobacteriota bacterium] diamond 498 150 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29209998 29209998 PRJNA719595_P_NODE_8529_length_246_cov_0.901734_g8494_i0 PRJNA719595 8529 246 0.901734 2.21826564 Bacteria 2 Bacteria Bacteria 156 2.57e-45   NR MCA1631309.1 1978231 g8494 i0 96.3 76.0609756097561 81 3 98.8 0 2 244 137 217 MCA1631309.1 signal recognition particle-docking protein FtsY [Acidobacteriota bacterium] diamond 18711 157 0.993630573248408 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29609545 29609545 PRJNA719595_P_NODE_9090_length_243_cov_0.917647_g9055_i0 PRJNA719595 9090 243 0.917647 2.22988221 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 57 3.31e-7   NR MBD0326210.1 2283092 g9055 i0 84.4 1.18518518518519 32 5 39.5 0 242 147 357 388 MBD0326210.1 threonine synthase [Pyrinomonadaceae bacterium] diamond 288 57 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30178333 30178333 PRJNA719595_P_NODE_8132_length_247_cov_0.896552_g8097_i0 PRJNA719595 8132 247 0.896552 2.21448344 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 153 2.470000000000001e-44   NR HEX7175471.1 2283092 g8097 i0 90.2 0.995951417004049 82 8 99.6 0 246 1 114 195 HEX7175471.1 arginine deiminase family protein [Pyrinomonadaceae bacterium] diamond 246 153 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30400044 30400044 PRJNA719595_P_NODE_7353_length_250_cov_0.881356_g7318_i0 PRJNA719595 7353 250 0.881356 2.20339 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 116 2.05e-28   NR HWT03022.1 2283092 g7318 i0 70 0.96 80 24 96 0 2 241 192 271 HWT03022.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 240 116 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30431614 30431614 PRJNA719595_P_NODE_6433_length_253_cov_0.866667_g6398_i0 PRJNA719595 6433 253 0.866667 2.19266751 Acidobacteriota bacterium 1978231 Bacteria Bacteria 146 4.49e-40   NR MDQ2746489.1 1978231 g6398 i0 84.5 2.98814229249012 84 13 99.6 0 253 2 61 144 MDQ2746489.1 HD domain-containing protein [Acidobacteriota bacterium] diamond 756 146 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30431616 30431616 PRJNA719595_P_NODE_7373_length_250_cov_0.881356_g7338_i0 PRJNA719595 7373 250 0.881356 2.20339 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 126 6.549999999999999e-32   NR HEV2915134.1 2283092 g7338 i0 74.7 2.988 83 21 99.6 0 2 250 332 414 HEV2915134.1 ATP-binding cassette domain-containing protein [Pyrinomonadaceae bacterium] diamond 747 126 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30620669 30620669 PRJNA719595_P_NODE_8173_length_247_cov_0.896552_g8138_i0 PRJNA719595 8173 247 0.896552 2.21448344 Terracidiphilus sp. 1964191 Bacteria Bacteria 145 4.92e-39   NR HEX8812537.1 1964191 g8138 i0 80.2 0.983805668016194 81 16 98.4 0 4 246 167 247 HEX8812537.1 hypothetical protein [Terracidiphilus sp.] diamond 243 145 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
30620671 30620671 PRJNA719595_P_NODE_9213_length_243_cov_0.917647_g9178_i0 PRJNA719595 9213 243 0.917647 2.22988221 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 154 2.2e-43   NR HYO79772.1 2212468 g9178 i0 92.5 0.987654320987654 80 6 98.8 0 241 2 288 367 HYO79772.1 ATP-binding protein [Bryobacteraceae bacterium] diamond 240 154 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30652174 30652174 PRJNA719595_P_NODE_9473_length_242_cov_0.923077_g9438_i0 PRJNA719595 9473 242 0.923077 2.23384634 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 109 2.02e-26   NR HYU80745.1 2910147 g9438 i0 68.4 1.95867768595041 79 25 97.9 0 6 242 168 246 HYU80745.1 serine hydrolase domain-containing protein [Vicinamibacterales bacterium] diamond 474 109 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30842019 30842019 PRJNA719595_P_NODE_8354_length_246_cov_0.901734_g8319_i0 PRJNA719595 8354 246 0.901734 2.21826564 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 112 2.75e-28   NR MEX1128915.1 2910147 g8319 i0 63.8 0.975609756097561 80 29 97.6 0 246 7 100 179 MEX1128915.1 SCO family protein [Vicinamibacterales bacterium] diamond 240 112 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31421350 31421350 PRJNA719595_P_NODE_7316_length_250_cov_0.881356_g7281_i0 PRJNA719595 7316 250 0.881356 2.20339 Bacteria 2 Bacteria Bacteria 128 2.58e-34   NR MBW8826653.1 1978231 g7281 i0 75.9 1.992 83 20 99.6 0 1 249 173 255 MBW8826653.1 tetratricopeptide repeat protein [Acidobacteriota bacterium] diamond 498 128 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31569276 31569276 PRJNA719595_P_NODE_6556_length_253_cov_0.866667_g6521_i0 PRJNA719595 6556 253 0.866667 2.19266751 Bryobacterales bacterium 2026791 Bacteria Bacteria 55.8 9.51e-7   NR MEX2299861.1 2026791 g6521 i0 80.8 0.308300395256917 26 5 30.8 0 3 80 352 377 MEX2299861.1 metallophosphoesterase [Bryobacterales bacterium] diamond 78 55.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
32328651 32328651 PRJNA719595_P_NODE_7099_length_251_cov_0.876404_g7064_i0 PRJNA719595 7099 251 0.876404 2.19977404 Acidobacteriota bacterium 1978231 Bacteria Bacteria 123 1.92e-33   NR MBA2304462.1 1978231 g7064 i0 72.3 0.99203187250996006 83 23 99.2 0 2 250 12 94 MBA2304462.1 hypothetical protein [Acidobacteriota bacterium] diamond 249 123 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32360221 32360221 PRJNA719595_P_NODE_6879_length_252_cov_0.871508_g6844_i0 PRJNA719595 6879 252 0.871508 2.19620016 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 55.1 4.34e-8   NR HSY47206.1 2651171 g6844 i0 53.7 0.488095238095238 41 19 48.8 0 193 71 3 43 HSY47206.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 123 55.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32644032 32644032 PRJNA719595_P_NODE_9140_length_243_cov_0.917647_g9105_i0 PRJNA719595 9140 243 0.917647 2.22988221 Acidobacteriota bacterium 1978231 Bacteria Bacteria 71.2 1.72e-12   NR MCC6992530.1 1978231 g9105 i0 54 0.777777777777778 63 29 77.8 0 242 54 226 288 MCC6992530.1 CpsD/CapB family tyrosine-protein kinase [Acidobacteriota bacterium] diamond 189 71.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32833221 32833221 PRJNA719595_P_NODE_6240_length_256_cov_1.327869_g6205_i0 PRJNA719595 6240 256 1.327869 3.39934464 Terriglobales bacterium 2282142 Bacteria Bacteria 42.7 0.0436   NR HXY51432.1 2282142 g6205 i0 53.1 0.375 32 15 37.5 0 88 183 228 259 HXY51432.1 cellulose synthase family protein [Terriglobales bacterium] diamond 96 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
32864700 32864700 PRJNA719595_P_NODE_6480_length_253_cov_0.866667_g6445_i0 PRJNA719595 6480 253 0.866667 2.19266751 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 165 2.7399999999999997e-47   NR HEY0656973.1 2283092 g6445 i0 91.6 3.93675889328063 83 7 98.4 0 3 251 181 263 HEY0656973.1 M28 family metallopeptidase [Pyrinomonadaceae bacterium] diamond 996 165 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;