RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA719595" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA719595 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27999827 27999827 PRJNA719595_P_NODE_8625_length_245_cov_0.906977_g8590_i0 PRJNA719595 8625 245 0.906977 2.22209365 Methanobacteriota archaeon 2026739 Archaea Archaea 85.5 1.73e-19   NR RAH07957.1 2026739 g8590 i0 53.5 1.0530612244898 86 35 99.2 1 244 2 12 97 RAH07957.1 MAG: hypothetical protein CMA04_007570 [Methanobacteriota archaeon] diamond 258 85.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28536602 28536602 PRJNA719595_P_NODE_8767_length_245_cov_0.906977_g8732_i0 PRJNA719595 8767 245 0.906977 2.22209365 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 134 4.26e-36   NR MFL2971360.1 2670411 g8732 i0 88.9 2.97551020408163 81 9 99.2 0 1 243 208 288 MFL2971360.1 rhomboid family intramembrane serine protease [Candidatus Thalassarchaeaceae archaeon] diamond 729 134 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;