contig_metadata
27 rows where bioproject = "PRJNA719595" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5813063 | 5813063 | PRJNA719595_P_NODE_7685_length_249_cov_0.886364_g7650_i0 | PRJNA719595 | 7685 | 249 | 0.886364 | 2.20704636 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 126 | 8.94e-34 | NR | HZJ15226.1 | 2811408 | g7650 | i0 | 79.3 | 0.987951807228916 | 82 | 17 | 98.8 | 0 | 247 | 2 | 123 | 204 | HZJ15226.1 glutamate 5-kinase [Chthoniobacteraceae bacterium] | diamond | 246 | 126 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 7088091 | 7088091 | PRJNA719595_P_NODE_3346_length_340_cov_3.082397_g3311_i0 | PRJNA719595 | 3346 | 340 | 3.082397 | 10.4801498 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 490 | 5.74e-134 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g3311 | i0 | 93.598 | 165.064705882353 | 328 | 21 | 96 | 0 | 2 | 329 | 2582841 | 2582514 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 56122 | 490 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 7088256 | 7088256 | PRJNA719595_P_NODE_9086_length_243_cov_0.917647_g9051_i0 | PRJNA719595 | 9086 | 243 | 0.917647 | 2.22988221 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 108 | 4.61e-19 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g9051 | i0 | 91.139 | 0.325102880658436 | 79 | 7 | 33 | 0 | 43 | 121 | 4663750 | 4663672 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 79 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 9637959 | 9637959 | PRJNA719595_P_NODE_7048_length_251_cov_0.876404_g7013_i0 | PRJNA719595 | 7048 | 251 | 0.876404 | 2.19977404 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 172 | 1.67e-38 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g7013 | i0 | 79.92 | 1.53386454183267 | 249 | 39 | 96 | 9 | 7 | 248 | 3783164 | 3783408 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 385 | 172 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 10121945 | 10121945 | PRJNA719595_P_NODE_9308_length_242_cov_0.923077_g9273_i0 | PRJNA719595 | 9308 | 242 | 0.923077 | 2.23384634 | Bacteria | 2 | Bacteria | Bacteria | 69.4 | 2.16e-7 | NTclustered | gi|1387286769|gb|CP023004.1| | 1796921 | g9273 | i0 | 100 | 395.54132231405 | 37 | 0 | 17 | 0 | 145 | 181 | 112989 | 112953 | Ereboglobus luteus strain Ho45, complete genome | blastn | 95721 | 69.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Ereboglobus | Ereboglobus luteus | |
| 13463245 | 13463245 | PRJNA719595_P_NODE_9211_length_243_cov_0.917647_g9176_i0 | PRJNA719595 | 9211 | 243 | 0.917647 | 2.22988221 | Aquisphaera giovannonii | 406548 | Bacteria | Bacteria | 261 | 3.34e-65 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g9176 | i0 | 86.066 | 82.5390946502058 | 244 | 32 | 100 | 2 | 1 | 243 | 3440678 | 3440436 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 20057 | 261 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 16011995 | 16011995 | PRJNA719595_P_NODE_6773_length_252_cov_0.871508_g6738_i0 | PRJNA719595 | 6773 | 252 | 0.871508 | 2.19620016 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 228 | 3.5399999999999984e-55 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g6738 | i0 | 83.004 | 1.00396825396825 | 253 | 41 | 100 | 2 | 1 | 252 | 3986251 | 3986000 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 253 | 228 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 17287501 | 17287501 | PRJNA719595_P_NODE_7574_length_249_cov_0.886364_g7539_i0 | PRJNA719595 | 7574 | 249 | 0.886364 | 2.20704636 | Phycisphaerae | 666505 | Bacteria | Bacteria | 123 | 1.05e-31 | NR | MDB5319606.1 | 2052180 | g7539 | i0 | 76.3 | 2.91566265060241 | 80 | 19 | 96.4 | 0 | 243 | 4 | 197 | 276 | MDB5319606.1 Beta-hexosaminidase [Phycisphaerales bacterium] | diamond | 726 | 124 | 0.991935483870968 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 18561309 | 18561309 | PRJNA719595_P_NODE_6875_length_252_cov_0.871508_g6840_i0 | PRJNA719595 | 6875 | 252 | 0.871508 | 2.19620016 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 63.2 | 1.5e-10 | NR | HEV3338919.1 | 2715253 | g6840 | i0 | 55.2 | 0.69047619047619 | 58 | 26 | 69 | 0 | 178 | 5 | 1 | 58 | HEV3338919.1 hypothetical protein [Pirellulales bacterium] | diamond | 174 | 63.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 23662492 | 23662492 | PRJNA719595_P_NODE_6439_length_253_cov_0.866667_g6404_i0 | PRJNA719595 | 6439 | 253 | 0.866667 | 2.19266751 | Singulisphaera sp. | 1906241 | Bacteria | Bacteria | 154 | 4.87e-43 | NR | MEJ7639405.1 | 1906241 | g6404 | i0 | 97.6 | 0.984189723320158 | 83 | 2 | 98.4 | 0 | 3 | 251 | 118 | 200 | MEJ7639405.1 serine/threonine-protein kinase [Singulisphaera sp.] | diamond | 249 | 154 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera sp. | |
| 26894039 | 26894039 | PRJNA719595_P_NODE_8621_length_245_cov_0.906977_g8586_i0 | PRJNA719595 | 8621 | 245 | 0.906977 | 2.22209365 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 94 | 8.37e-21 | NR | MDG2093943.1 | 2052180 | g8586 | i0 | 58.8 | 1.95918367346939 | 80 | 33 | 98 | 0 | 245 | 6 | 223 | 302 | MDG2093943.1 ABC transporter ATP-binding protein [Phycisphaerales bacterium] | diamond | 480 | 94 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 27146403 | 27146403 | PRJNA719595_P_NODE_9342_length_242_cov_0.923077_g9307_i0 | PRJNA719595 | 9342 | 242 | 0.923077 | 2.23384634 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 119 | 3.84e-30 | NR | HKI31433.1 | 2052164 | g9307 | i0 | 67.1 | 1.95867768595041 | 79 | 26 | 97.9 | 0 | 238 | 2 | 59 | 137 | HKI31433.1 glycosyltransferase family 4 protein [Gemmataceae bacterium] | diamond | 474 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 27273325 | 27273325 | PRJNA719595_P_NODE_6423_length_253_cov_0.866667_g6388_i0 | PRJNA719595 | 6423 | 253 | 0.866667 | 2.19266751 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 117 | 2.36e-28 | NR | WP_206293489.1 | 2807512 | g6388 | i0 | 73.8 | 0.948616600790514 | 80 | 21 | 94.9 | 0 | 253 | 14 | 636 | 715 | WP_206293489.1 S8 family serine peptidase [Humisphaera borealis] | diamond | 240 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 27904640 | 27904640 | PRJNA719595_P_NODE_9245_length_243_cov_0.882353_g9210_i0 | PRJNA719595 | 9245 | 243 | 0.882353 | 2.14411779 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 101 | 5.830000000000001e-26 | NR | MFO0888213.1 | 2691532 | g9210 | i0 | 82.3 | 0.765432098765432 | 62 | 11 | 76.5 | 0 | 2 | 187 | 16 | 77 | MFO0888213.1 helix-turn-helix transcriptional regulator [Isosphaeraceae bacterium] | diamond | 186 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 27999826 | 27999826 | PRJNA719595_P_NODE_8225_length_247_cov_0.896552_g8190_i0 | PRJNA719595 | 8225 | 247 | 0.896552 | 2.21448344 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 51.2 | 3.87e-5 | NR | MCC6494168.1 | 2715253 | g8190 | i0 | 53.7 | 0.497975708502024 | 41 | 19 | 49.8 | 0 | 239 | 117 | 349 | 389 | MCC6494168.1 FG-GAP repeat protein [Pirellulales bacterium] | diamond | 123 | 51.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 28062679 | 28062679 | PRJNA719595_P_NODE_7645_length_249_cov_0.886364_g7610_i0 | PRJNA719595 | 7645 | 249 | 0.886364 | 2.20704636 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 64.3 | 5.73e-11 | NR | HSU66604.1 | 2876886 | g7610 | i0 | 60.9 | 3.19277108433735 | 64 | 25 | 77.1 | 0 | 53 | 244 | 11 | 74 | HSU66604.1 hypothetical protein [Tepidisphaeraceae bacterium] | diamond | 795 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 28599686 | 28599686 | PRJNA719595_P_NODE_7927_length_248_cov_0.891429_g7892_i0 | PRJNA719595 | 7927 | 248 | 0.891429 | 2.21074392 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 170 | 2.35e-50 | NR | MEE2642961.1 | 2026780 | g7892 | i0 | 100 | 0.991935483870968 | 82 | 0 | 99.2 | 0 | 246 | 1 | 153 | 234 | MEE2642961.1 ABC transporter permease subunit [Planctomycetota bacterium] | diamond | 246 | 170 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28851913 | 28851913 | PRJNA719595_P_NODE_8188_length_247_cov_0.896552_g8153_i0 | PRJNA719595 | 8188 | 247 | 0.896552 | 2.21448344 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 47.4 | 8.72e-4 | NR | MFO0951831.1 | 2691532 | g8153 | i0 | 72.4 | 0.704453441295547 | 29 | 7 | 34 | 1 | 114 | 31 | 263 | 291 | MFO0951831.1 pyruvate dehydrogenase complex E1 component subunit beta [Isosphaeraceae bacterium] | diamond | 174 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 28914966 | 28914966 | PRJNA719595_P_NODE_6428_length_253_cov_0.866667_g6393_i0 | PRJNA719595 | 6428 | 253 | 0.866667 | 2.19266751 | uncultured Chthoniobacterales bacterium | 1836801 | Bacteria | Bacteria | 136 | 1.7799999999999998e-37 | NR | CAA9226802.1 | 1836801 | g6393 | i0 | 88 | 0.889328063241107 | 75 | 9 | 88.9 | 0 | 27 | 251 | 3 | 77 | CAA9226802.1 MAG: hypothetical protein AVDCRST_MAG42-897 [uncultured Chthoniobacterales bacterium] | diamond | 225 | 136 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | uncultured Chthoniobacterales bacterium | |||
| 29199611 | 29199611 | PRJNA719595_P_NODE_8949_length_244_cov_0.912281_g8914_i0 | PRJNA719595 | 8949 | 244 | 0.912281 | 2.22596564 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 75.9 | 7.66e-14 | NR | HWB06935.1 | 2026801 | g8914 | i0 | 51.9 | 0.971311475409836 | 79 | 38 | 97.1 | 0 | 242 | 6 | 347 | 425 | HWB06935.1 DUF3987 domain-containing protein [Verrucomicrobiales bacterium] | diamond | 237 | 75.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 29325602 | 29325602 | PRJNA719595_P_NODE_8409_length_246_cov_0.901734_g8374_i0 | PRJNA719595 | 8409 | 246 | 0.901734 | 2.21826564 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 157 | 1.59e-44 | NR | HCQ84632.1 | 2026801 | g8374 | i0 | 98.8 | 2 | 82 | 1 | 100 | 0 | 1 | 246 | 192 | 273 | HCQ84632.1 DNA modification methylase [Verrucomicrobiales bacterium] | diamond | 492 | 157 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 29672703 | 29672703 | PRJNA719595_P_NODE_7370_length_250_cov_0.881356_g7335_i0 | PRJNA719595 | 7370 | 250 | 0.881356 | 2.20339 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 134 | 1.2499999999999999e-34 | NR | MDB5322919.1 | 2052180 | g7335 | i0 | 75.9 | 3.912 | 83 | 16 | 99.6 | 1 | 1 | 249 | 322 | 400 | MDB5322919.1 S-methyl-5-thioadenosine phosphorylase [Phycisphaerales bacterium] | diamond | 978 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 30273511 | 30273511 | PRJNA719595_P_NODE_8852_length_244_cov_0.912281_g8817_i0 | PRJNA719595 | 8852 | 244 | 0.912281 | 2.22596564 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 110 | 7.62e-26 | NR | MCH2160789.1 | 2052180 | g8817 | i0 | 67.9 | 0.995901639344262 | 81 | 26 | 99.6 | 0 | 1 | 243 | 196 | 276 | MCH2160789.1 tetratricopeptide repeat protein [Phycisphaerales bacterium] | diamond | 243 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 30525913 | 30525913 | PRJNA719595_P_NODE_8953_length_244_cov_0.912281_g8918_i0 | PRJNA719595 | 8953 | 244 | 0.912281 | 2.22596564 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 88.2 | 3.4e-18 | NR | HSH39841.1 | 2201154 | g8918 | i0 | 76.7 | 0.737704918032787 | 60 | 14 | 73.8 | 0 | 64 | 243 | 1 | 60 | HSH39841.1 NADH-quinone oxidoreductase subunit M [Chthoniobacterales bacterium] | diamond | 180 | 88.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 32233662 | 32233662 | PRJNA719595_P_NODE_8238_length_247_cov_0.896552_g8203_i0 | PRJNA719595 | 8238 | 247 | 0.896552 | 2.21448344 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 97.4 | 2.14e-21 | NR | HEX4149505.1 | 2715253 | g8203 | i0 | 59.8 | 0.995951417004049 | 82 | 32 | 98.4 | 1 | 3 | 245 | 67 | 148 | HEX4149505.1 phosphoenolpyruvate--protein phosphotransferase [Pirellulales bacterium] | diamond | 246 | 97.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 32518407 | 32518407 | PRJNA719595_P_NODE_9219_length_243_cov_0.917647_g9184_i0 | PRJNA719595 | 9219 | 243 | 0.917647 | 2.22988221 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 144 | 2.939999999999999e-38 | NR | HEX8678412.1 | 2201154 | g9184 | i0 | 93.8 | 0.987654320987654 | 80 | 5 | 98.8 | 0 | 2 | 241 | 399 | 478 | HEX8678412.1 FlgO family outer membrane protein [Chthoniobacterales bacterium] | diamond | 240 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 32528842 | 32528842 | PRJNA719595_P_NODE_4879_length_289_cov_1.129630_g4844_i0 | PRJNA719595 | 4879 | 289 | 1.12963 | 3.2646307 | Bacteria | 2 | Bacteria | Bacteria | 47.4 | 5.22e-4 | NR | MDR1190431.1 | 2026801 | g4844 | i0 | 33.8 | 2.58477508650519 | 71 | 42 | 68.5 | 1 | 2 | 199 | 68 | 138 | MDR1190431.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 747 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;