RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA719595", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA719595 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24936064 24936064 PRJNA719595_P_NODE_8860_length_244_cov_0.912281_g8825_i0 PRJNA719595 8860 244 0.912281 2.22596564 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 122 3.1599999999999997e-32   NR KAK0051780.1 112525 g8825 i0 77.5 31.5 80 18 98.4 0 5 244 162 241 KAK0051780.1 40S ribosomal protein S2 [Biomphalaria pfeifferi] diamond 7686 123 0.991869918699187 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria pfeifferi
28346895 28346895 PRJNA719595_P_NODE_8126_length_247_cov_0.896552_g8091_i0 PRJNA719595 8126 247 0.896552 2.21448344 Ylistrum balloti 509963 Mollusca Mollusca 42.4 0.0333   NR XP_060069831.1 509963 g8091 i0 51.3 0.473684210526316 39 19 47.4 0 203 87 56 94 XP_060069831.1 neo-calmodulin-like [Ylistrum balloti] diamond 117 42.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;