RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA719595" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA719595 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17771110 17771110 PRJNA719595_P_NODE_6974_length_251_cov_0.876404_g6939_i0 PRJNA719595 6974 251 0.876404 2.19977404 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 96.7 8.379999999999999e-23   NR KAJ5070606.1 1746090 g6939 i0 52.6 1.9003984063745 76 36 90.8 0 2 229 50 125 KAJ5070606.1 ras and ef-hand domain-containing protein [Anaeramoeba ignava] diamond 477 96.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
32106765 32106765 PRJNA719595_P_NODE_7298_length_250_cov_0.881356_g7263_i0 PRJNA719595 7298 250 0.881356 2.20339 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 50.8 5.63e-5   NR KAJ5075220.1 1746090 g7263 i0 44.9 0.936 78 40 91.2 2 241 14 269 345 KAJ5075220.1 bypass of stop codon protein [Anaeramoeba ignava] diamond 234 50.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;