RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA719595", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA719595 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28473326 28473326 PRJNA719595_P_NODE_9486_length_242_cov_0.923077_g9451_i0 PRJNA719595 9486 242 0.923077 2.23384634 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 50.8 5.24e-5   NR NLV41592.1 2030809 g9451 i0 41.2 1.67355371900826 68 30 84.3 2 242 39 272 329 NLV41592.1 PASTA domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 405 50.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31442480 31442480 PRJNA719595_P_NODE_6476_length_253_cov_0.866667_g6441_i0 PRJNA719595 6476 253 0.866667 2.19266751 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 75.1 2.28e-14   NR MBI2434700.1 2030809 g6441 i0 47.4 1.75494071146245 76 40 90.1 0 3 230 105 180 MBI2434700.1 GNAT family N-acetyltransferase [Candidatus Hydrogenedentota bacterium] diamond 444 75.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;