RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA716463" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA716463 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12187768 12187768 PRJNA716463_P_NODE_76030_length_271_cov_4.156566_g75613_i0 PRJNA716463 76030 271 4.156566 11.26429386 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 396 9.969999999999997e-106   NTclustered gi|68271543|gb|DQ086724.1| 127150 g75613 i0 92.806 164 278 13 100 5 1 271 314 591 Rhynchomonas nasuta isolate RHYNCHO large subunit ribosomal RNA gene, partial sequence blastn 44444 396 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
23661633 23661633 PRJNA716463_P_NODE_83779_length_265_cov_3.447917_g83362_i0 PRJNA716463 83779 265 3.447917 9.13698005 Bodo saltans 75058 Euglenozoa other_Eukaryota 181 1.35e-56   NR CUG51243.1 75058 g83362 i0 97.7 0.99622641509434 88 2 99.6 0 2 265 59 146 CUG51243.1 40S ribosomal protein S19, putative [Bodo saltans] diamond 264 181 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32170311 32170311 PRJNA716463_P_NODE_95998_length_255_cov_1.692308_g95581_i0 PRJNA716463 95998 255 1.692308 4.3153854 Bodo saltans 75058 Euglenozoa other_Eukaryota 97.8 1.9300000000000003e-21   NR CUE71036.1 75058 g95581 i0 44.7 2.95294117647059 85 46 98.8 1 1 252 895 979 CUE71036.1 membrane-associated protein, putative [Bodo saltans] diamond 753 97.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;