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contig_metadata

24 rows where bioproject = "PRJNA716463", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermomicrobiota · 24 ✖

tax_kingdom 1

  • Pseudomonadati · 24 ✖

bioproject 1

  • PRJNA716463 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
708231 708231 PRJNA716463_P_NODE_61681_length_282_cov_3.129187_g61264_i0 PRJNA716463 61681 282 3.129187 8.82430734 Thermomicrobium roseum 500 Bacteria Bacteria 115 3.27e-21   NTclustered gi|221155340|gb|CP001275.1| 309801 g61264 i0 94.595 0.26241134751773 74 4 26 0 209 282 1811771 1811844 Thermomicrobium roseum DSM 5159, complete genome blastn 74 115 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium roseum
9636359 9636359 PRJNA716463_P_NODE_37628_length_299_cov_2.933628_g37211_i0 PRJNA716463 37628 299 2.933628 8.77154772 Thermomicrobium roseum 500 Bacteria Bacteria 139 2.07e-28   NTclustered gi|221155340|gb|CP001275.1| 309801 g37211 i0 95.402 4.55852842809365 87 4 29 0 152 238 133728 133642 Thermomicrobium roseum DSM 5159, complete genome blastn 1363 139 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium roseum
13462099 13462099 PRJNA716463_P_NODE_72791_length_274_cov_2.179104_g72374_i0 PRJNA716463 72791 274 2.179104 5.97074496 Thermomicrobium sp. CFH 7336 1969469 Bacteria Bacteria 175 2.59e-50   NR WP_252126945.1 2951987 g72374 i0 91.1 0.985401459854015 90 8 98.5 0 272 3 1 90 WP_252126945.1 glucose-6-phosphate dehydrogenase [Thermomicrobium sp. CFH 73360] diamond 270 175 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp. CFH 73360
17285177 17285177 PRJNA716463_P_NODE_102534_length_249_cov_2.187500_g102117_i0 PRJNA716463 102534 249 2.1875 5.446875 Thermalbibacter longus 2951981 Bacteria Bacteria 169 3.06e-50   NR WP_284057696.1 2951981 g102117 i0 100 0.987951807228916 82 0 98.8 0 248 3 165 246 WP_284057696.1 metal ABC transporter ATP-binding protein [Thermalbibacter longus] diamond 246 169 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermalbibacter Thermalbibacter longus
17286011 17286011 PRJNA716463_P_NODE_43954_length_296_cov_2.645740_g43537_i0 PRJNA716463 43954 296 2.64574 7.8313904 Thermomicrobiales bacterium 2482790 Bacteria Bacteria 124 5.28e-33   NR HLU34548.1 2482790 g43537 i0 66.7 0.881756756756757 87 26 85.1 1 294 43 156 242 HLU34548.1 metallophosphoesterase family protein [Thermomicrobiales bacterium] diamond 261 124 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales     Thermomicrobiales bacterium
21111246 21111246 PRJNA716463_P_NODE_86797_length_263_cov_1.931579_g86380_i0 PRJNA716463 86797 263 1.931579 5.08005277 Thermomicrobium roseum 500 Bacteria Bacteria 228 3.719999999999999e-55   NTclustered gi|221157271|gb|CP001276.1| 309801 g86380 i0 82.692 0.988593155893536 260 41 98 4 4 261 892565 892308 Thermomicrobium roseum DSM 5159 plasmid, complete sequence blastn 260 228 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium roseum
27020371 27020371 PRJNA716463_P_NODE_29662_length_310_cov_2.506329_g29245_i0 PRJNA716463 29662 310 2.506329 7.7696199 Thermomicrobiales bacterium 2482790 Bacteria Bacteria 82 7.38e-17   NR HEV2072685.1 2482790 g29245 i0 77.6 1.42258064516129 49 11 47.4 0 308 162 91 139 HEV2072685.1 ADP-ribosylation factor-like protein [Thermomicrobiales bacterium] diamond 441 82 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales     Thermomicrobiales bacterium
27557329 27557329 PRJNA716463_P_NODE_19664_length_310_cov_3.818565_g19247_i0 PRJNA716463 19664 310 3.818565 11.8375515 Thermomicrobium sp. 1969469 Bacteria Bacteria 98.2 2.2699999999999994e-23   NR MDW8060593.1 1969469 g19247 i0 100 0.474193548387097 49 0 47.4 0 162 308 4 52 MDW8060593.1 hypothetical protein [Thermomicrobium sp.] diamond 147 98.2 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
27778720 27778720 PRJNA716463_P_NODE_29524_length_310_cov_2.540084_g29107_i0 PRJNA716463 29524 310 2.540084 7.8742604 Thermomicrobium sp. 1969469 Bacteria Bacteria 181 8.479999999999999e-57   NR MCS7255197.1 1969469 g29107 i0 82.1 1.13225806451613 117 4 96.8 1 309 10 5 121 MCS7255197.1 hypothetical protein [Thermomicrobium sp.] diamond 351 181 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
27915218 27915218 PRJNA716463_P_NODE_25225_length_310_cov_2.966245_g24808_i0 PRJNA716463 25225 310 2.966245 9.1953595 Thermomicrobium 499 Bacteria Bacteria 94.4 1.2300000000000002e-21   NR MCS7256768.1 1969469 g24808 i0 100 2.38064516129032 49 0 47.4 0 148 2 88 136 MCS7256768.1 CRISPR-associated protein Cas4 [Thermomicrobium sp.] diamond 738 94.4 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
27999811 27999811 PRJNA716463_P_NODE_96425_length_254_cov_3.325967_g96008_i0 PRJNA716463 96425 254 3.325967 8.44795618 Thermomicrobium sp. 1969469 Bacteria Bacteria 77.4 4.5e-15   NR MDW8059768.1 1969469 g96008 i0 95 0.980314960629921 40 2 47.2 0 1 120 188 227 MDW8059768.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Thermomicrobium sp.] diamond 249 77.4 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
28914946 28914946 PRJNA716463_P_NODE_83468_length_266_cov_1.336788_g83051_i0 PRJNA716463 83468 266 1.336788 3.55585608 Thermalbibacter longus 2951981 Bacteria Bacteria 90.9 8.28e-20   NR WP_284057147.1 2951981 g83051 i0 100 0.473684210526316 42 0 47.4 0 265 140 235 276 WP_284057147.1 DUF4232 domain-containing protein [Thermalbibacter longus] diamond 126 90.9 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermalbibacter Thermalbibacter longus
28989121 28989121 PRJNA716463_P_NODE_118028_length_231_cov_6.715190_g117610_i0 PRJNA716463 118028 231 6.71519 15.5120889 Bacteria 2 Bacteria Bacteria 83.2 1.29e-18   NR WP_414484928.1 2057 g117610 i0 97.4 0.987012987012987 38 1 49.4 0 117 230 37 74 WP_414484928.1 copper resistance protein CopC, partial [Sphaerobacter thermophilus] diamond 228 83.2 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Sphaerobacterales Sphaerobacteraceae Sphaerobacter Sphaerobacter thermophilus
29262339 29262339 PRJNA716463_P_NODE_71369_length_275_cov_2.232673_g70952_i0 PRJNA716463 71369 275 2.232673 6.13985075 Thermomicrobium sp. 1969469 Bacteria Bacteria 190 1.7899999999999997e-57   NR MCS7255635.1 1969469 g70952 i0 98.9 1.95272727272727 91 1 99.3 0 275 3 110 200 MCS7255635.1 copper-containing nitrite reductase [Thermomicrobium sp.] diamond 537 190 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
29514926 29514926 PRJNA716463_P_NODE_121930_length_224_cov_4.072848_g121512_i0 PRJNA716463 121930 224 4.072848 9.12317952 Thermomicrobium sp. 4228-Ro 2993937 Bacteria Bacteria 139 8.47e-38   NR WP_265940291.1 2993937 g121512 i0 94.6 0.991071428571429 74 4 99.1 0 3 224 1 74 WP_265940291.1 M24 family metallopeptidase [Thermomicrobium sp. 4228-Ro] diamond 222 139 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp. 4228-Ro
29704172 29704172 PRJNA716463_P_NODE_60970_length_283_cov_1.666667_g60553_i0 PRJNA716463 60970 283 1.666667 4.71666761 Thermomicrobium sp. 4228-Ro 2993937 Bacteria Bacteria 137 1.6e-35   NR WP_265939306.1 2993937 g60553 i0 66.7 0.92226148409894 87 29 92.2 0 22 282 100 186 WP_265939306.1 hypothetical protein [Thermomicrobium sp. 4228-Ro] diamond 261 137 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp. 4228-Ro
30936797 30936797 PRJNA716463_P_NODE_108594_length_244_cov_1.678363_g108176_i0 PRJNA716463 108594 244 1.678363 4.09520572 Thermomicrobium roseum 500 Bacteria Bacteria 86.7 1.21e-17   NR WP_012641900.1 500 g108176 i0 86.3 0.627049180327869 51 7 62.7 0 242 90 472 522 WP_012641900.1 malate synthase A [Thermomicrobium roseum] diamond 153 86.7 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium roseum
31136433 31136433 PRJNA716463_P_NODE_78775_length_269_cov_3.377551_g78358_i0 PRJNA716463 78775 269 3.377551 9.08561219 Thermomicrobium 499 Bacteria Bacteria 172 1.72e-51   NR MCS7255172.1 1969469 g78358 i0 98.8 1.85130111524164 83 1 92.6 0 3 251 146 228 MCS7255172.1 peptidylprolyl isomerase [Thermomicrobium sp.] diamond 498 172 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
31379301 31379301 PRJNA716463_P_NODE_117716_length_232_cov_3.276730_g117298_i0 PRJNA716463 117716 232 3.27673 7.6020136 Thermomicrobium sp. 1969469 Bacteria Bacteria 142 8.759999999999999e-40   NR MCS7256466.1 1969469 g117298 i0 89.6 0.995689655172414 77 8 99.6 0 2 232 143 219 MCS7256466.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Thermomicrobium sp.] diamond 231 142 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
31474239 31474239 PRJNA716463_P_NODE_98616_length_252_cov_3.050279_g98199_i0 PRJNA716463 98616 252 3.050279 7.68670308 Thermomicrobium sp. 1969469 Bacteria Bacteria 165 2.64e-46   NR MCS7256449.1 1969469 g98199 i0 98.8 0.988095238095238 83 1 98.8 0 251 3 42 124 MCS7256449.1 hypothetical protein [Thermomicrobium sp.] diamond 249 165 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
32265235 32265235 PRJNA716463_P_NODE_110238_length_242_cov_3.751479_g109820_i0 PRJNA716463 110238 242 3.751479 9.07857918 Thermomicrobium sp. 1969469 Bacteria Bacteria 163 4.32e-46   NR MCS7256007.1 1969469 g109820 i0 100 0.991735537190083 80 0 99.2 0 240 1 105 184 MCS7256007.1 amylo-alpha-1,6-glucosidase [Thermomicrobium sp.] diamond 240 163 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
32265269 32265269 PRJNA716463_P_NODE_85218_length_264_cov_2.842932_g84801_i0 PRJNA716463 85218 264 2.842932 7.50534048 Thermomicrobium sp. 1969469 Bacteria Bacteria 170 4.369999999999999e-47   NR MCS7256970.1 1969469 g84801 i0 100 0.988636363636364 87 0 98.9 0 3 263 306 392 MCS7256970.1 primosomal protein N' [Thermomicrobium sp.] diamond 261 170 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp.
32581512 32581512 PRJNA716463_P_NODE_56919_length_286_cov_1.338028_g56502_i0 PRJNA716463 56919 286 1.338028 3.82676008 Thermomicrobium sp. 4228-Ro 2993937 Bacteria Bacteria 199 5.280000000000001e-59   NR WP_265940293.1 2993937 g56502 i0 95.8 0.996503496503496 95 4 99.7 0 285 1 369 463 WP_265940293.1 glycosyl hydrolase family 18 protein [Thermomicrobium sp. 4228-Ro] diamond 285 199 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermomicrobium Thermomicrobium sp. 4228-Ro
32644018 32644018 PRJNA716463_P_NODE_91060_length_259_cov_2.844086_g90643_i0 PRJNA716463 91060 259 2.844086 7.36618274 Thermalbibacter longus 2951981 Bacteria Bacteria 158 3.2e-45   NR WP_284057862.1 2951981 g90643 i0 98.8 0.984555984555985 85 1 98.5 0 257 3 84 168 WP_284057862.1 hypothetical protein [Thermalbibacter longus] diamond 255 158 1 Bacteria   Pseudomonadati Thermomicrobiota Thermomicrobia Thermomicrobiales Thermomicrobiaceae Thermalbibacter Thermalbibacter longus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;