RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA716463", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA716463 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26894017 26894017 PRJNA716463_P_NODE_88321_length_261_cov_5.042553_g87904_i0 PRJNA716463 88321 261 5.042553 13.16106333 Spiromyces aspiralis 68401 Fungi Fungi 120 9.07e-33   NR KAJ1676526.1 68401 g87904 i0 62.7 4.77011494252874 83 31 95.4 0 10 258 2 84 KAJ1676526.1 60S ribosomal protein L20B, partial [Spiromyces aspiralis] diamond 1245 120 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
28357258 28357258 PRJNA716463_P_NODE_34966_length_299_cov_3.769912_g34549_i0 PRJNA716463 34966 299 3.769912 11.27203688 root 1 Root_unresolved Root_unresolved 43.5 0.0346   NR KAJ9065280.1 34485 g34549 i0 48.9 1.19397993311037 45 23 45.2 0 163 297 1 45 KAJ9065280.1 hypothetical protein DSO57_1021341 [Entomophthora muscae] diamond 357 43.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;