contig_metadata
1 row where bioproject = "PRJNA716463" and tax_clade = "ac1 cluster"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29241492 | 29241492 | PRJNA716463_P_NODE_109969_length_243_cov_0.905882_g109551_i0 | PRJNA716463 | 109969 | 243 | 0.905882 | 2.20129326 | Clavibacter | 1573 | Bacteria | Bacteria | 158 | 1.6e-46 | NR | KRO44318.1 | 1655569 | g109551 | i0 | 98.8 | 3.95061728395062 | 80 | 1 | 98.8 | 0 | 2 | 241 | 89 | 168 | KRO44318.1 MAG: AraC family transcriptional regulator, partial [Actinobacteria bacterium BACL2 MAG-120813-bin23] | diamond | 960 | 158 | 1 | Bacteria | ac1 cluster | Bacillati | Actinomycetota | Actinomycetes | Actinobacteria bacterium BACL2 MAG-120813-bin23 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;