RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA716463", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA716463 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8360866 8360866 PRJNA716463_P_NODE_15827_length_311_cov_3.470588_g15410_i0 PRJNA716463 15827 311 3.470588 10.79352868 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 507 5.16e-139   NTclustered gi|1402550486|gb|MH488772.1| 2231170 g15410 i0 96.141 8.2443729903537 311 5 100 1 1 311 249 552 Guttulinopsis rogosa isolate T1 small subunit ribosomal RNA gene, partial sequence blastn 2564 507 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
12186794 12186794 PRJNA716463_P_NODE_126090_length_200_cov_4.181102_g125672_i0 PRJNA716463 126090 200 4.181102 8.362204 Sandona mutans 563755 SAR_Eukaryotes SAR_Eukaryotes 248 2.06e-61   NTclustered gi|224996445|gb|FJ654277.1| 563755 g125672 i0 98.582 106.72 141 0 100 1 1 139 515 655 Cercozoa sp. ATCC50314p145at3 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21344 248 1 Eukaryota Sar   Cercozoa   Glissomonadida Sandonidae Sandona Sandona mutans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;