RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA716463", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA716463 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22384919 22384919 PRJNA716463_P_NODE_123798_length_213_cov_4.278571_g123380_i0 PRJNA716463 123798 213 4.278571 9.11335623 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 128 2e-34   NR MBI2202562.1 2053607 g123380 i0 84.1 1.94366197183099 69 11 97.2 0 5 211 228 296 MBI2202562.1 TauD/TfdA family dioxygenase [Candidatus Rokuibacteriota bacterium] diamond 414 128 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32455047 32455047 PRJNA716463_P_NODE_32859_length_300_cov_3.224670_g32442_i0 PRJNA716463 32859 300 3.22467 9.6740100000000009 Candidatus Rokubacteria bacterium 13_1_2 1805343 Bacteria Bacteria 76.6 1.27e-14   NR OLE39288.1 1805343 g32442 i0 78 1 50 11 50 0 1 150 115 164 OLE39288.1 MAG: hypothetical protein AUG00_02675 [Candidatus Rokubacteria bacterium 13_1_20CM_2_70_7] diamond 300 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium 13_1_20CM_2_70_7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;